| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3217 |
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| Symbol | |
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| ID | 4280119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3854038 |
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| End bp | 3854904 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136035 |
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| Product | pirin domain-containing protein |
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| Protein accession | YP_751892 |
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| Protein GI | 114564378 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT TACAGCGTTT TAGCGCCTTA CCCGCAATTG ACGGTGATGG CGTGAACATC
AATCGTGTTG CCGACTTTGA TAAGCTTCGT TTTGATCCAT ATTTAATGAT CGATGAGATT
AAGTCTGATG ATGAACAAGA TTTTATTGGT GGTTTTCCGC CGCACCCACA TAGAGGTGTA
GAAACTTTTA CTTATATTCG TAAAGGCGGA TTTGAACATC GCGATCAAAT GGGCAATGTT
AAACCTATTC GTGCGGGTGA TGTGCAGTGG ATGAGTACTG GCAGTGGCGT GGTGCATTCT
GAAATGCCAT TAGCAGATGC CAAAGAAGGG CTGCATGGGT TTCAAATTTG GATCAATATG
CCTGCAAAAC ACAAAATGCG TCCACCTATT TATCAAGACA CTAGCAAACA GGCTAACCCA
CGTGTAGAAA ACGAACACGG CGCAACACTA GTTGCCTTGG CGGGGGATTG GGGTTTTAAT
CATGAGCCAC ATAAGATTAC CTCAACGATT CAAGGTTTAG CTGGCCATGG TGCTATTGCG
GATTTAACGT TAACTGAATA TGGTCATGGC ACGCTGAATC TTGCCGAACA TCAAACCGTT
TGCGTTTATG TGTATCAAGG TGAGCTTAAC TATATTGATG CACAAGGTTT GCGAGAAACC
GCAAGAGCAG GGCAGTTTTT AGCTTTAGAT GCACTTGAAG TCTGTCATTT TCAAACCGAG
GCCACTGGAG CTGGATTGTT AATATTAGCA GGCAAGCCGA TTAACGAAAA AATTGTTCAC
ATGGGGCCGT TTGTTATGAA TACCCAGGCA GAGATCGAAC AAGCTGTACG CGATTATCAA
CAAGGTCACT TTGGCCAAAT TGCTTAA
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| Protein sequence | MKVLQRFSAL PAIDGDGVNI NRVADFDKLR FDPYLMIDEI KSDDEQDFIG GFPPHPHRGV
ETFTYIRKGG FEHRDQMGNV KPIRAGDVQW MSTGSGVVHS EMPLADAKEG LHGFQIWINM
PAKHKMRPPI YQDTSKQANP RVENEHGATL VALAGDWGFN HEPHKITSTI QGLAGHGAIA
DLTLTEYGHG TLNLAEHQTV CVYVYQGELN YIDAQGLRET ARAGQFLALD ALEVCHFQTE
ATGAGLLILA GKPINEKIVH MGPFVMNTQA EIEQAVRDYQ QGHFGQIA
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