| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3215 |
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| Symbol | |
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| ID | 4280117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3850761 |
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| End bp | 3852194 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136033 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_751890 |
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| Protein GI | 114564376 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTT CCTCACTTGG TCTGAATGCT GCTATTTTAA AAGCGGTTGA AAAACAAGGT
TATGACACCC CATCTCCAAT TCAAGCACAA GCAATTCCAG CTGTTTTAGC CGGTCAAGAT
GTAATGGCAG CAGCACAAAC TGGGACAGGA AAAACAGCTG GTTTTACCCT GCCAATTTTA
GAATTATTAT CTAAAGGTGA ACGAGCGCAA CGTGGTCAAG TCCGTGCGCT AGTATTAACA
CCAACACGCG AGCTTGCCGC GCAAGTACAA GAAAGCGTCG CAACTTACGG TGTAAACTTA
CCGTTAAAAT CAGCTGTAGT ATTTGGTGGT GTGTCCATCG TGCCACAACT AGCTGCACTC
AGAAATGGTG TCGACATTTT AGTCGCAACA CCAGGCCGTT TACTCGACTT ATGCCAGCAA
AAAGCCATTA GCTTTAGCAA ATTAGAAATT CTAGTGTTGG ACGAAGCAGA CCGCATGCTA
GACATGGGCT TTATTCGCGA CATTAAAAAA GTATTAGCAT TATTACCCGC TAAGCGTCAA
AACTTAATGT TTTCAGCAAC ATTCTCGAAT GAAATTCGTG AACTTGCGAA AGGATTAGTT
AACAATCCGG TAGAAATTTC AGTTACACCG CGTAACGCAA CAGCAAACAC TGTGACCCAG
TGTGTGTATC CAGTGGATAA AACCCGCAAG TCAATGGCGC TAATCGAACT GATTAAAACC
AATGATTGGA AACAGGTGTT AGTGTTTTCT CGTACTAAAC ATGGTGCTAA CCGTTTAGCG
AAAAGCCTAG AAGCTGCTGG CATCAAAGCC GCTGCCATTC ATGGTAATAA AAGCCAAACA
GCACGTACTA AAGCATTGGC AGATTTTAAA GCCGGTGCAG TACAAGTCAT GGTTGCAACA
GATATTGCCG CACGTGGTAT CGACATCGAT CAACTGCCAT TTGTGGTTAA CTTTGACTTA
CCTAACGTAC CTGAAGATTA CGTGCATCGT ATTGGCCGTA CCGGCCGTGC TGGTTCAACA
GGTCAAGCAG TATCATTAGT GGGTCTTGAA GAAGTTAAAT TACTGCATGA TATCGAGCGT
TTAATCAATC GCGTTATTGA GCGTAAGCAA CTTGCTGGTT TTGAAGCACC ATTCACGATC
CCTGAAGCGA GTAGCAGATC TGGCGGTAAT AGCGCTAAAA AGCCAAACCC GAATCGCAGT
AAACATGCTC AACAGCATGC AAATGATGGC GCTCATGGTG ATAAGCCAGC GCGTAAACCT
GACTCTCGCC AACCATCACG CAGTCACGAT AAGCCTGTAG ATCCTAAAGC AGAAGCTAGA
GCGAATGGTA ATAAACCACC ACAGCGTAAT CGTCCACCAC GTCGCAGTGG CACTGCACCA
GTAGTTTCAA GTAATAGCAG TAATCCTTAT GCCAACGCTA AAGTTAAAAG CTAA
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| Protein sequence | MSFSSLGLNA AILKAVEKQG YDTPSPIQAQ AIPAVLAGQD VMAAAQTGTG KTAGFTLPIL
ELLSKGERAQ RGQVRALVLT PTRELAAQVQ ESVATYGVNL PLKSAVVFGG VSIVPQLAAL
RNGVDILVAT PGRLLDLCQQ KAISFSKLEI LVLDEADRML DMGFIRDIKK VLALLPAKRQ
NLMFSATFSN EIRELAKGLV NNPVEISVTP RNATANTVTQ CVYPVDKTRK SMALIELIKT
NDWKQVLVFS RTKHGANRLA KSLEAAGIKA AAIHGNKSQT ARTKALADFK AGAVQVMVAT
DIAARGIDID QLPFVVNFDL PNVPEDYVHR IGRTGRAGST GQAVSLVGLE EVKLLHDIER
LINRVIERKQ LAGFEAPFTI PEASSRSGGN SAKKPNPNRS KHAQQHANDG AHGDKPARKP
DSRQPSRSHD KPVDPKAEAR ANGNKPPQRN RPPRRSGTAP VVSSNSSNPY ANAKVKS
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