| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3213 |
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| Symbol | |
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| ID | 4280115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3847254 |
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| End bp | 3849044 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136031 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_751888 |
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| Protein GI | 114564374 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGT CGTTAGAAAA GTCATTAGCC AAATGGCTTA AAAGCCAACA ATCTTCTTGT
GGTATTTTCC TCAAACTATC GGTGTTATGT GGTGTGCTCA ATGGCATCGC CATCGTGGCG
CAGGCCTATT TTATTGCCCA GATTTTACAG GGTGTCATTA TTGATAACCT TGTTCCCGCA
GCATTAAGCC TTCAATTTTT TGCCCTTATT GGTTTGTTAT TTGTCCGAGC CTTATTGGCG
CAAGTACGTG AACGGATAAG CTTTGAGGCG GGCAAACGTT TACGCACCGA TATACGCCAA
GCGGTACTCA ATAAATTAGT CGCATTAGGG CCGGTATTTA TTAAAGGCAA ACCTGCAGGG
GCATGGGCAA CCTTAGTCTT TGAGCAAGTT GAAGATTTGC ATGACTTTTA TGCTAAATAC
CTACCGCAGA TGATGTTGGC GGGGTTTATT CCTTTACTGA TATTAGCCTG TGTATTTCCG
CTTAATTGGG CCGCTGGGAT CATTTTAATG ACAACGGCAC CATTGATTCC GTTATTTATG
ATTTTAGTGG GTATGGGCGC CGCAGATGCT AATCGTAAAA ATATGCAGGC GTTGTCGCGT
TTAAGCGGCC ACTTTATGGA TCGCCTAAAA GGCCTGCAAA CGTTAAAGTT GTTTAATCGC
GGCGAAGCAG AGTTAGTGAA TATTGAACAT GCTTCAGAAG ATTTTCGTGC CCGGACGATG
TCGGTATTAC GCTTAGCCTT TCTTAGCTCC GCGGTATTAG AGTTTTTTGC CGCGGTATCG
ATTGCCGTAT TGGCGGTGTA CTTTGGCTTT AGTTACTTAG GTCATTTAGA TTTTGGTCAC
TATGGCGTAC AGGTAAGTTT GTTTACCGGC ATGTTTGTGT TGATTTTAGC GCCAGAATTT
TACCAACCCC TGCGAGACTT AGGCACTCAT TACCACGCCA AAGCTCAAGC AATTGGTGCT
GCAGAAGCGC TGGTTGAGCT GCTTGATTAT CAAGTTAATA CACCCGCTAA AATCCATTCA
ACATCATTAA ATATGGCGTT TACAGCCGAA AGTATAAACA TTCAAGCGAT TGGGGTTGAA
GTGTTTAGCT TAGATGGACA GCGTTTAGCT GGGCCTATTT CATTTACATT ACCCGCTGGT
GAGCATTGGG CTATTGTGGG CCCGAGTGGC GCGGGTAAAA CCAGTTTACT GAATGCGTTG
CTAGGTTTTT TACCTTATCA GGGATCGTTG CTCATTAATG GTCAGGAATT GTCACAACTT
AATGTGGCCC AGTGGCGTCA ACATTTGGCT TGGTTAGGAC AAGATCCGCA ATTGTTTCAT
GGCACGGTGC GAGAAAATGT CGCGTTGGCC AATCCGCAAT TAAACGATGC GCAGATTATG
ACGTTGCTAG AACAAGCTGA TATCAGTGAG TTTGTAAAAC AACAACCATT AGGCCTCGAT
TTAGTGATAA GCGACCAAAG TGCAGGTGTG TCAGTGGGCC AGGCACAACG TTTTGCTTTA
GCACGTGCAT TGGCTCAACC CGCAAAATTG TTTTTATTAG ATGAACCTAC CGCTAGCTTA
GATGCCCAAA GCGAGCAATC AGTGCTGACT TCGTTGTACC GTGCGATGCA GTCGACAACA
GCATTAACTG TTACCCATAA ATTAGATGAT CTACACAACA TGAATTACAT ATTGGTGATG
GATAACGGAA TGGTGGTACA ACACGGTCAT GTAAATGATT TACGGCAGGC TGATGGATTA
TTAGCACAAA TGCTCAATCA ACAACAGAAT CTACAACAGG AGGTGAGCTG A
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| Protein sequence | MDKSLEKSLA KWLKSQQSSC GIFLKLSVLC GVLNGIAIVA QAYFIAQILQ GVIIDNLVPA
ALSLQFFALI GLLFVRALLA QVRERISFEA GKRLRTDIRQ AVLNKLVALG PVFIKGKPAG
AWATLVFEQV EDLHDFYAKY LPQMMLAGFI PLLILACVFP LNWAAGIILM TTAPLIPLFM
ILVGMGAADA NRKNMQALSR LSGHFMDRLK GLQTLKLFNR GEAELVNIEH ASEDFRARTM
SVLRLAFLSS AVLEFFAAVS IAVLAVYFGF SYLGHLDFGH YGVQVSLFTG MFVLILAPEF
YQPLRDLGTH YHAKAQAIGA AEALVELLDY QVNTPAKIHS TSLNMAFTAE SINIQAIGVE
VFSLDGQRLA GPISFTLPAG EHWAIVGPSG AGKTSLLNAL LGFLPYQGSL LINGQELSQL
NVAQWRQHLA WLGQDPQLFH GTVRENVALA NPQLNDAQIM TLLEQADISE FVKQQPLGLD
LVISDQSAGV SVGQAQRFAL ARALAQPAKL FLLDEPTASL DAQSEQSVLT SLYRAMQSTT
ALTVTHKLDD LHNMNYILVM DNGMVVQHGH VNDLRQADGL LAQMLNQQQN LQQEVS
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