| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3212 |
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| Symbol | |
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| ID | 4280114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3845509 |
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| End bp | 3847212 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136030 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_751887 |
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| Protein GI | 162139116 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTACGGC CGTTTGTTGC TTTGTTCCGC CGCCAGTGGC TGATGATGTT AGTCGGTTTA
TTGCTTACGT TTACCACGTT ACTCACCGGT ATTGGTCTGT TGTCTTTATC TGGCTGGTTC
TTATCTGCCA GTGCGGTAGC AGGCTTAGCC GTGGTGACGG CCCAAACGTT CAACTTTTTT
ACTCCAGCAG GAGGCGTTCG ATTTTTCTCC ATCGCCAGAA CGGCAAGTCG TTACGGCGAG
CGCTTAGCAA CGCATGAAGC GACCTTTAAA TTGCTGACTC AACTGCGTGT TTGGGCATGG
AATAAGTTGC TGCCGTTGAG TGCCGCTAAC TTACAAGGTC TGCGTAGAGG CGACTTACTC
AATCGTTTAG TTGCCGACAT TGATACGTTA GATCATCTCT ACTTACGCTT ACTCACGCCA
ATGGCCGCAT CTTTGATGAT GATTGGGGTA TTGTTGGTGT TTCTCGGGTG GTTTGATAAC
CATTTAGCCT TGAGTTTATG TGCATTATTA TTAGCAGCTT GGTTTATTTT ACCGTTAGTA
TTTTATTATT TAGGTAAGTC TCCTGGGCAA GCATTGATGC AAGCGCAAAG GCAATATCGA
GTTGAGTTGC TTGATGTTAT TCAGGGGCAA GCCGAATTAA GTTTATTTGG TGCTAATAAA
CGTTATTTAG CGCAACTGGA ACAAGCACAG CGGGCTTTAT TTAGTCAGCA AACCACCATG
GCTAATATTA CTGGGCTGAG CCAAGCCTTA TTGATACTAA TCAATGGCTG TGCGGTGGTG
TTTATGTTGT ATTTAGCAGG TCAAAGCGTT GGAGATGCCT CGCCTCCGGG GCCGTTAATG
GCCTTAATGG TGTTTGCCAC TATGGCCAGT CTTGAAATGA TGATGCCAAT AGCGGGTGCA
TTTCAACATT TGTCTAGCAC TGTACTTGCC GCCCGAAGGG TGACTGAAAT AACTGAACAA
ACACCGAGTG TTAAATTTAA TGCTAACAGT CACTTGCAAG CAAACCACGG CGCCTTGCTG
CTCAGTGGTG TTCACTTTGG TTATCATAGC CATTCACCAG TGTTACAAGG TGTAGATTTG
ACTCTTAAAG CTGGTGACAA AGTGGCTATT TTAGGCCCCA CAGGTTGTGG GAAATCAAGC
TTGTTGGGGC TCATTACTCG TGATTGGGCG CCGCAACAAG GGTCTATTAC GCTTGATGGC
GAACCAATAA ATGCCTACAG CGATGCCAAT CTTCGTGCGT CGATGACAGT GGTGAGCCAG
CGAGTTTATC TGTTTTCTGG CACCTTGCGT GACAATTTAG CCTTGGCGCT GGCCTATTTG
CCAGATGAAG CCAAAAAAGC TCATGATCAC CGTTTAATAG AAGTATTACA GCGTGTTGGC
TTACAAACCT TGTTGCAGGG CGATAAACCA TTAGATTGCT GGATAGGTGA GGGCGGCCGA
CAATTATCGG GTGGTGAGCA GCGCAGAATT GGGGTCGCAA GGGCATTATT GCGTGACGCT
CCTTTGTTAT TGCTCGATGA ACCGACTGAA GGATTAGATA AACGTACCGA GCGTGAAATC
CTTAACGTGT TGCTCGATTT TGCTGAGCAT AAAACCCTGT TAATGATAAG TCATCGTTTG
ACCGCGTTAG AGCAAATGGA TTGCGTGTAC CTTTTTCAGC AAGGTCGACT AATTCAACAG
TTAGCGGATA AAATAAGCCA TTAA
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| Protein sequence | MLRPFVALFR RQWLMMLVGL LLTFTTLLTG IGLLSLSGWF LSASAVAGLA VVTAQTFNFF
TPAGGVRFFS IARTASRYGE RLATHEATFK LLTQLRVWAW NKLLPLSAAN LQGLRRGDLL
NRLVADIDTL DHLYLRLLTP MAASLMMIGV LLVFLGWFDN HLALSLCALL LAAWFILPLV
FYYLGKSPGQ ALMQAQRQYR VELLDVIQGQ AELSLFGANK RYLAQLEQAQ RALFSQQTTM
ANITGLSQAL LILINGCAVV FMLYLAGQSV GDASPPGPLM ALMVFATMAS LEMMMPIAGA
FQHLSSTVLA ARRVTEITEQ TPSVKFNANS HLQANHGALL LSGVHFGYHS HSPVLQGVDL
TLKAGDKVAI LGPTGCGKSS LLGLITRDWA PQQGSITLDG EPINAYSDAN LRASMTVVSQ
RVYLFSGTLR DNLALALAYL PDEAKKAHDH RLIEVLQRVG LQTLLQGDKP LDCWIGEGGR
QLSGGEQRRI GVARALLRDA PLLLLDEPTE GLDKRTEREI LNVLLDFAEH KTLLMISHRL
TALEQMDCVY LFQQGRLIQQ LADKISH
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