| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3210 |
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| Symbol | |
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| ID | 4280112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3842570 |
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| End bp | 3843784 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136028 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit B |
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| Protein accession | YP_751885 |
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| Protein GI | 114564371 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
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| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0909603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGC AACAGAAAAA GCCCAGCAAA CAAGACAGCT ATTACGCTCA TGGCGACTCG
ATGCGCAGCT ATTTACGTTC GTTGTGGATA GCCAATGGTC GTAGCACCAA AGGTGATGTG
CATATTCGTG ATGCGATTGA TGTTAAGCGC ACCATGCACA TTGTGGGCAT GTGCTTATTT
CCTGCAATGT TATTGGGCAT GTACAACATT GGCCTGCAGG CTCAAATAGC CATTATTGCC
GGGGCAACAC AGCCGGATGT ATGGCAACTT GCCTTTTATA ACTTACTGTT TGGCCCACTT
ACGCAAAGCG CTGGTTTAAT CAGTTTGTTT GCCTATGGTG CCAGTTTTTA TGTGCCATTT
TACTTAACTG CGTTGGTGGT CAGTTTGGTG TGGGAAGTGG TGTTTGCCAA AGTGCGTCAC
CAAGAACTGC ACGAAGGCTT CTTTATCACC GCGTTATTGT TCTCACTCAT TTTACCTATC
TCTACGCCGT TATGGATTGT GGCCTTGGGC CTTAGTTTTG GTGTGGTCGT GGCAAAAGAG
ATGTTTGGTG GTATGGGTTA CAACTTTTTA AACCCTGCAC TGGCGGGATA TGCATTTATT
TATTTTGCAT ACCCAACAGA GGTGGTGTCA TTAAGCCAGT TTGTAGCGGT TGATGGCTTT
TCTGGTGCAA CGACGCTAAC CCTTACCGTG GCTAAAAAAT TAAGCTTTAT CGATGTGAGC
TGGTTTAGCG TATTAAGCGA CAGTACTTGG TGGGATGCCT TTTTAGGCTT TACCCCTGGT
GCCGTTGGTG AAACCAGTAC CTTAGCCATT CTTATTGGTG GTGGTATTTT ACTGCTTACC
CGCGTAGCTG ATTGGCGTGT GGTAGCCGGT GTGATGCTAG GTATGATCAT TACCGTTTTG
TTGTTTAACT ATTTCGGTTC TAGCAGAAAT CCTATGTCGG CAATGCCGTG GACATGGCAT
TTAGTCACTG GTGGTTTTGC ACTGGGGATG ATGTTTATGG CCACCGATCC GGTAACGGCG
TCATATACCC GCAAGGCTAA ATTTGCGTTC GGTTTTATGA TTGGTTTTAT GACCATTATT
ATTCGTTTAC TGAATGCCAA AATGCCAGAG GGCATTATGC TAGCCATTTT GTTTACTAAT
TTATGGGCAC CGTTGTTCGA CTACCTAGTC GCTCAAGCTA ATATCAAACG GAGACTAAAA
CGTCATGGCC TTTAA
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| Protein sequence | MSQQQKKPSK QDSYYAHGDS MRSYLRSLWI ANGRSTKGDV HIRDAIDVKR TMHIVGMCLF
PAMLLGMYNI GLQAQIAIIA GATQPDVWQL AFYNLLFGPL TQSAGLISLF AYGASFYVPF
YLTALVVSLV WEVVFAKVRH QELHEGFFIT ALLFSLILPI STPLWIVALG LSFGVVVAKE
MFGGMGYNFL NPALAGYAFI YFAYPTEVVS LSQFVAVDGF SGATTLTLTV AKKLSFIDVS
WFSVLSDSTW WDAFLGFTPG AVGETSTLAI LIGGGILLLT RVADWRVVAG VMLGMIITVL
LFNYFGSSRN PMSAMPWTWH LVTGGFALGM MFMATDPVTA SYTRKAKFAF GFMIGFMTII
IRLLNAKMPE GIMLAILFTN LWAPLFDYLV AQANIKRRLK RHGL
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