Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3210 |
Symbol | |
ID | 4280112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3842570 |
End bp | 3843784 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638136028 |
Product | Na(+)-translocating NADH-quinone reductase subunit B |
Protein accession | YP_751885 |
Protein GI | 114564371 |
COG category | [C] Energy production and conversion |
COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0909603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGC AACAGAAAAA GCCCAGCAAA CAAGACAGCT ATTACGCTCA TGGCGACTCG ATGCGCAGCT ATTTACGTTC GTTGTGGATA GCCAATGGTC GTAGCACCAA AGGTGATGTG CATATTCGTG ATGCGATTGA TGTTAAGCGC ACCATGCACA TTGTGGGCAT GTGCTTATTT CCTGCAATGT TATTGGGCAT GTACAACATT GGCCTGCAGG CTCAAATAGC CATTATTGCC GGGGCAACAC AGCCGGATGT ATGGCAACTT GCCTTTTATA ACTTACTGTT TGGCCCACTT ACGCAAAGCG CTGGTTTAAT CAGTTTGTTT GCCTATGGTG CCAGTTTTTA TGTGCCATTT TACTTAACTG CGTTGGTGGT CAGTTTGGTG TGGGAAGTGG TGTTTGCCAA AGTGCGTCAC CAAGAACTGC ACGAAGGCTT CTTTATCACC GCGTTATTGT TCTCACTCAT TTTACCTATC TCTACGCCGT TATGGATTGT GGCCTTGGGC CTTAGTTTTG GTGTGGTCGT GGCAAAAGAG ATGTTTGGTG GTATGGGTTA CAACTTTTTA AACCCTGCAC TGGCGGGATA TGCATTTATT TATTTTGCAT ACCCAACAGA GGTGGTGTCA TTAAGCCAGT TTGTAGCGGT TGATGGCTTT TCTGGTGCAA CGACGCTAAC CCTTACCGTG GCTAAAAAAT TAAGCTTTAT CGATGTGAGC TGGTTTAGCG TATTAAGCGA CAGTACTTGG TGGGATGCCT TTTTAGGCTT TACCCCTGGT GCCGTTGGTG AAACCAGTAC CTTAGCCATT CTTATTGGTG GTGGTATTTT ACTGCTTACC CGCGTAGCTG ATTGGCGTGT GGTAGCCGGT GTGATGCTAG GTATGATCAT TACCGTTTTG TTGTTTAACT ATTTCGGTTC TAGCAGAAAT CCTATGTCGG CAATGCCGTG GACATGGCAT TTAGTCACTG GTGGTTTTGC ACTGGGGATG ATGTTTATGG CCACCGATCC GGTAACGGCG TCATATACCC GCAAGGCTAA ATTTGCGTTC GGTTTTATGA TTGGTTTTAT GACCATTATT ATTCGTTTAC TGAATGCCAA AATGCCAGAG GGCATTATGC TAGCCATTTT GTTTACTAAT TTATGGGCAC CGTTGTTCGA CTACCTAGTC GCTCAAGCTA ATATCAAACG GAGACTAAAA CGTCATGGCC TTTAA
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Protein sequence | MSQQQKKPSK QDSYYAHGDS MRSYLRSLWI ANGRSTKGDV HIRDAIDVKR TMHIVGMCLF PAMLLGMYNI GLQAQIAIIA GATQPDVWQL AFYNLLFGPL TQSAGLISLF AYGASFYVPF YLTALVVSLV WEVVFAKVRH QELHEGFFIT ALLFSLILPI STPLWIVALG LSFGVVVAKE MFGGMGYNFL NPALAGYAFI YFAYPTEVVS LSQFVAVDGF SGATTLTLTV AKKLSFIDVS WFSVLSDSTW WDAFLGFTPG AVGETSTLAI LIGGGILLLT RVADWRVVAG VMLGMIITVL LFNYFGSSRN PMSAMPWTWH LVTGGFALGM MFMATDPVTA SYTRKAKFAF GFMIGFMTII IRLLNAKMPE GIMLAILFTN LWAPLFDYLV AQANIKRRLK RHGL
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