| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3208 |
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| Symbol | |
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| ID | 4280110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3841192 |
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| End bp | 3841812 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136026 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_751883 |
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| Protein GI | 114564369 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.196002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGTG CTATTTCAAC TCGTGAGATC CTAACATCGC CAATTATGGC TAATAACCCT
GTAGCAATAC AGGTATTAGG TGTGTGTTCG GCATTAGCGG TCAGTAATTC GATGCAAACT
GCATTCGTCA TGACACTTGC TGTGACCTTT GTGTTGGTCT TTTCTAACTT GATTATTTCA
AGTATCCGCA ATTTTATTCC TAATAGTGTG CGGATTATTG CGCAAATGAC GGTGATTGCC
TCGTTGGTGA TTATTGTCGA CATGGTGTTA CAAGACGTGG CGTATGAATT GTCAAAACAG
TTATCTGTGT TTGTCAGTTT GATCATCACT AACTGTATCA TTATGGGCCG AGCTGAAGCC
TTTGCGATGA AACATCCGCC TCATTTAGCC GTATTTGATG CCTTGGGCAA TGCTTTAGGT
TATGGCTTAA TTTTAATGGG CGTGGCGTTT ATTCGTGAGC TGCTGGGGCG TGGTACTTTG
TTTGGTCACA ACATATTTAC CACTATTGAA AATGGCGGTT GGTATCTTGC TAATGAAATG
TTCACTTTAC CACCCAGCGC GTTCTTTTTA ATTGGCGTGA TGATTTGGGT CATTAAAATC
ATTCAGCGTA AGCGCGGATA A
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| Protein sequence | MSRAISTREI LTSPIMANNP VAIQVLGVCS ALAVSNSMQT AFVMTLAVTF VLVFSNLIIS
SIRNFIPNSV RIIAQMTVIA SLVIIVDMVL QDVAYELSKQ LSVFVSLIIT NCIIMGRAEA
FAMKHPPHLA VFDALGNALG YGLILMGVAF IRELLGRGTL FGHNIFTTIE NGGWYLANEM
FTLPPSAFFL IGVMIWVIKI IQRKRG
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