| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3200 |
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| Symbol | |
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| ID | 4280102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3834187 |
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| End bp | 3835617 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136018 |
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| Product | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase |
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| Protein accession | YP_751875 |
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| Protein GI | 114564361 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.923411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTTT CTCTCCCAGC TTTTGAAAAT GCGCGCGTTT TAGTGATTGG CGATGTGATG
TTAGATCGCT ATTGGGTAGG CCCTACGGGA CGCATTTCAC CCGAAGCCCC TGTACCTGTT
GTTAAAATTA ATCAAATTGA AGACAGGCCC GGCGGCGCCG CCAACGTGGC ATTAAACATT
GCGACATTAG GTGGACATGT CCAGTTAGCG GGCATAGTAG GCCAAGATGA AACCGCACAA
GCATTAACCC AAGGTGTAAA AGTGTTTGGC GTTGAACCGC AATGGTTAAC GGTAGCAGAC
AAGCCGACAA TTACTAAATT ACGGGTATTG TCGCGTAATC AACAGTTAAT CCGCTTAGAT
TTTGAAGAGC AATTTGATAA AGCGACTAGC CAAGCATTAT TCGCGCAAAG CGAAGCCATT
TTAGATAATG TCGATGTATT GGTATTGTCA GATTATGCCA AAGGCGCCAT TGATGAACCT
AAGGACTTTA TTGCTAAAGC GCGAGCCAAA GGGGTAAAGG TTTTAGTTGA TCCAAAAGGG
CATGATTTTG CTCGTTATCA CGGCGCGTCA TTAATCACCC CAAATATGAG TGAATTTGAA
GCGGTTGTCG GTACGGTAAC CAGCGAAGAT GATTTAATCG AAAAAGCCCA GAAACTGATC
AAGTTGCACG ACTTTGAAGC TATTTTAGTA ACTCGCTCAG AAAAGGGCAT GACGTTAGTG
TCGCAAAACC AACCAGAATT GCATATTCCA ACCGTTGCAC GTGAAGTTCA TGATGTTACG
GGAGCTGGTG ATACGGTGAT TTCTGCTTTA GCGACCTCAA TTGCTGCGGG TGCTTCGTTA
GCGCAAGCTT GTGCGATAGC CAATACTGCC GCGGGTGTGG TTGTGGGTAA ACTAGGCACT
TCAACGGTTA GCCGCATTGA ACTTATCCAA GCGTTAGCCC TTAACCATGG CGAGTCTGGT
TTTGGGGTAA TGACAGAAGA TCAATTAGCT TATGCGATGG ATCAGGCACG TTTACGCGGT
GAGCGTATTG TAATGACTAA CGGTTGTTTT GATATTTTGC ATGCTGGCCA TGTGAGCTAT
TTACAACAAG CCAAAGCATT AGGTGATCGT CTTATTGTTG CTGTAAATGA TGATAGCTCG
GTGACGCGCT TAAAAGGCCC TGGACGTCCT GTTAATCCTG TCGACCGTCG TATGGCTGTT
TTAGCGGGCT TAGCATCGGT AGATTGGGTG GTGCCTTTCA CTGAAGACAC ACCACAACGT
ATTATTACCC GATTATTGCC AGACTCCTTA GTTAAAGGCG GCGATTACAA AGTGGAAGAT
ATTGCTGGTG GTGCTGAAGT GATAGCGGCA GGTGGCAAGG TTGAAGTGCT CGGATTTGAG
GACGGTGTAT CAACAACTGC GATTATTCAA AATATTATGT CACAAAAATA G
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| Protein sequence | MKVSLPAFEN ARVLVIGDVM LDRYWVGPTG RISPEAPVPV VKINQIEDRP GGAANVALNI
ATLGGHVQLA GIVGQDETAQ ALTQGVKVFG VEPQWLTVAD KPTITKLRVL SRNQQLIRLD
FEEQFDKATS QALFAQSEAI LDNVDVLVLS DYAKGAIDEP KDFIAKARAK GVKVLVDPKG
HDFARYHGAS LITPNMSEFE AVVGTVTSED DLIEKAQKLI KLHDFEAILV TRSEKGMTLV
SQNQPELHIP TVAREVHDVT GAGDTVISAL ATSIAAGASL AQACAIANTA AGVVVGKLGT
STVSRIELIQ ALALNHGESG FGVMTEDQLA YAMDQARLRG ERIVMTNGCF DILHAGHVSY
LQQAKALGDR LIVAVNDDSS VTRLKGPGRP VNPVDRRMAV LAGLASVDWV VPFTEDTPQR
IITRLLPDSL VKGGDYKVED IAGGAEVIAA GGKVEVLGFE DGVSTTAIIQ NIMSQK
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