Gene Sfri_3197 details

Gene Information

• Locus tag: Sfri_3197
• ID: 4280099
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 3831570
• End bp: 3832268
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638136015
• Product: hypothetical protein
• Protein accession: YP_751872
• Protein GI: 114564358

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTAT CACCTTATTT TACTAAGCAA GATCAAAGTG TGTTTATTTC GGCTCAACAA 
GCCAGTGACT TCGCCAAAAA AATCGCTGGA GATTTCAACC CTATTCATGA TGTGGGCGCT 
AAACGCTTTT GTGTCCCTGG CGATTTATTA TTTGCACTAG TGTTGACCCA ATACGGCCTA 
AGCCAAAACA TGCAGTTTAA GTTTGCCGGC ATGGTTGGTG ACAACGTTGA GCTTCACGTC 
GATAAAAATG TGGCCAATAA ATTCAGCATT AGCGACACCA AAGGCAAAGA ATATCTGCAT 
ATCGAACGTC AGGGTGAAGT GTGCCAATGT GATATACAAA CAGCGGCATT TATTAAAAGC 
TATGTCGCTT TTTCAGGATT GAACTTTACC CATGTACTTG TGCCAATGAT GAAGCAATAC 
AAGGTCATGA TTAATCCTGA TCGCCCATTA GTAATTTATG AAAGCATGTC ATTTCATTTA 
GATCATTTTG ATTTCAGCAC CATTAGTTTG CACCTTATCA AACAAGACTT AGCCATTGAT 
GGTAAGCGTG GCGATGTCAC CCTCACCTTT GAACTGCAAA GCGAAGGCAA AGTGATAGGT 
AGCGGAATCA AAACATTAGT ATTAAGCGGT TTGCGTGCTT TTGATGACGA GCAAGCGCAG 
CAAATGTGTG ACAGATATGA AAGCAGAAAG TTAGCGTAA 

 

Protein sequence

MFLSPYFTKQ DQSVFISAQQ ASDFAKKIAG DFNPIHDVGA KRFCVPGDLL FALVLTQYGL 
SQNMQFKFAG MVGDNVELHV DKNVANKFSI SDTKGKEYLH IERQGEVCQC DIQTAAFIKS 
YVAFSGLNFT HVLVPMMKQY KVMINPDRPL VIYESMSFHL DHFDFSTISL HLIKQDLAID 
GKRGDVTLTF ELQSEGKVIG SGIKTLVLSG LRAFDDEQAQ QMCDRYESRK LA