| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3188 |
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| Symbol | |
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| ID | 4280090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3817097 |
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| End bp | 3817915 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136006 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_751863 |
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| Protein GI | 114564349 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTAG TATCTATGCC AGGGCAACAA GCCAAAGGCA AAGTGTGGTT AGTCGGCGCC
GGTCCTGGCG ACGTTGAACT ACTAACACTA AAAGCCTATC GCATTCTTAA ACAAGCCGAT
GCAGTGTTAT ATGACGCATT AGTCAGCCAA GACATTTTAG ATTTGATCCC CAGTAACGCT
GAAAAAATTG CTGTGGGTAA GCGCGCAGGT AAACACAGCG CAGCTCAAGA TGAAATTAAT
CAGCTATTGG TGACTAAAGC ATATACCCGT AAAAATGTTG TGCGTTTAAA AGGCGGCGAC
CCGTTTATTT TTGGCCGCGG CGGCGAAGAG CTACAAACTT TAGTGGCTGC CGGTATTGCT
TTTGAAGTAG TCCCAGGTAT TACCGCTGCC AGTGGTACTT CCGCTTATGC AGGTATCCCG
CTAACGCATC GTGATTATGC CCAGGGTGTC ACCTTTATCA CTGGTCATTG TCAGTTAGCG
AGTCGCCCTA TGGATTGGCA GGGTTATGCT AACACTAACA ATACTTTAGT AGTGTATATG
GGCATATTAA ATGCCAATAT TATTAGTGAT GGTTTAATCA ACGCAGGCCG CAGTGCTGAT
ACGCCAGTGG CCATTGTGTC TAACGCGACC ACGTCATCAC AACAGCGGTT TATTGGTAAA
TTAGGCGAGC TGGCTCAATT AGCCGCAGAT CCTGCTTTAC AGATGCCTGC GCTGATGATT
ATTGGTGAGG TTGTTGAATT AGCTGACATC TTAAATTGGT TTGATCCCGT CAATGCGCAA
CAAAAAACAG ATTTAGACAC AGTCGCTAAA GCGCTGTAG
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| Protein sequence | MELVSMPGQQ AKGKVWLVGA GPGDVELLTL KAYRILKQAD AVLYDALVSQ DILDLIPSNA
EKIAVGKRAG KHSAAQDEIN QLLVTKAYTR KNVVRLKGGD PFIFGRGGEE LQTLVAAGIA
FEVVPGITAA SGTSAYAGIP LTHRDYAQGV TFITGHCQLA SRPMDWQGYA NTNNTLVVYM
GILNANIISD GLINAGRSAD TPVAIVSNAT TSSQQRFIGK LGELAQLAAD PALQMPALMI
IGEVVELADI LNWFDPVNAQ QKTDLDTVAK AL
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