| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3181 |
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| Symbol | |
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| ID | 4280083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3809081 |
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| End bp | 3810370 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638135999 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_751856 |
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| Protein GI | 114564342 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCTG CATCGTCATT ATCGTCTGCC GTTTTATTTG ATCACCAAGC ACTACGCGAT
CAATTCCCGG CGCTTAAACA GACCATTGGC GATCATCCTT TGTGTTACTT AGACACCGCA
GCAACGAGCC AAAAACCGCA AGCGGTCATT GATGCTATGA CCGAGTACTA CCAACTCAAC
AACGCCAATG TGCACCGTGC GGCGCATCAA TTGTCTGCAC GGGCAACTCA ACAATATGAA
GCGGTTCGTC AACAAGTGGC TGAATTTATC CACGCCCAGC GTCAAGACGA AATCATTTTT
ACCCACGGCA CCACAGAATC GATCAATATG GTGGCCTACG GACTGACGTC ACAGATCAAG
CCAAATGATG TGATATTAGT TGATACCGCA GCCCACCACG CCAATATTGT TCCTTGGCAG
GAACTGGCAA AGCGCACCGG TGCGGTGATC AAACCGATCC CGCTGACAAC AGACGCGCAA
CTGGATATAA CCGCTTTTGA TCAATTATTA GCCCTAAAAC CTAAAGTGGT TACCCTATGC
CATGTGTCAA ATGCCTTGGG CACATTAAAC CCAGTCAATG AGCTAGTCGC AAAAGCCAAA
GCCGTCGGCG CACTAACCTT GGTTGATGGC GCTCAGGCCA TTGCCCATTT ATCCGTTGAT
GTACAACTAA TTGATTGTGA CTTTTATGTG TTTTCAGGCC ATAAAATGTA TGGGCCAACA
GGGGTGGGAG TTTTATATGG TCGATATACA GAGCTCGATA AATTAACCCC AATGCTCACT
GGCGGCGAGA TGATCAAAAC CGTGAGTTTT GAACAGACTG AGTTTGGTGC GTTACCAAAT
CGCCTTGAAG CTGGCACGCC CGCAATCGCA GAAGTGATTG GCCTAGGGGC TGCAATTCAT
TTTTTACAGC AATTGCCACG CGAGCAAATA CTTGCACATG AACAACAATT GCTGCGCTAT
TTACAGCAGC AACTGCAACA ACTTGGCGCT ATCGAATTGT ATGGTATTAC CAATGATAAG
CACTCCGGTG ATAAGCACTG CGCTGATGGT CAACGCCATA ATATTGGTGC TGTGGCTTTT
AATCTGCAAG GTGAACATCA CCAAGATGTG GGGATTTTAC TCGACCAACA AGCTGTGGCC
GTTCGTTGTG GTCATCATTG CGCTATGCCG CTAATGACCA GCCTTAATTT AGGCGGCTGT
TGCCGTGCAT CAATAGGCAT CTATACTAAT AAGCAAGATG TTGATCAATT TATTCATGCA
CTTAATACTG TAAAAGAGTT ATTGTTATAG
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| Protein sequence | MKPASSLSSA VLFDHQALRD QFPALKQTIG DHPLCYLDTA ATSQKPQAVI DAMTEYYQLN
NANVHRAAHQ LSARATQQYE AVRQQVAEFI HAQRQDEIIF THGTTESINM VAYGLTSQIK
PNDVILVDTA AHHANIVPWQ ELAKRTGAVI KPIPLTTDAQ LDITAFDQLL ALKPKVVTLC
HVSNALGTLN PVNELVAKAK AVGALTLVDG AQAIAHLSVD VQLIDCDFYV FSGHKMYGPT
GVGVLYGRYT ELDKLTPMLT GGEMIKTVSF EQTEFGALPN RLEAGTPAIA EVIGLGAAIH
FLQQLPREQI LAHEQQLLRY LQQQLQQLGA IELYGITNDK HSGDKHCADG QRHNIGAVAF
NLQGEHHQDV GILLDQQAVA VRCGHHCAMP LMTSLNLGGC CRASIGIYTN KQDVDQFIHA
LNTVKELLL
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