Gene Sfri_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3180 
Symbol 
ID4280082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3807928 
End bp3808968 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content43% 
IMG OID638135998 
Productaldo/keto reductase 
Protein accessionYP_751855 
Protein GI114564341 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATATC AACGTATCGC GCATTCTAAC CTTGAGGTGA GTAAAATCTG CCTCGGCACC 
ATGACTTGGG GAGAACAAAA TACTCAAGCC GACGCTTTTG CTCAACTCGA TTATGCTATT
GGTCAAGGCG TTAACTTTAT TGATACCGCT GAAATGTACC CGGTTCCACC TAAAGCTGAA
ACCCAGGGTG AAACCGAACG TATCATTGGT AACTACCTCA AAGCGCAAGG TAATCGCGAC
AATTTAGTGA TTGCCACTAA AGTGGCTGCG CCTGGTGGTA AAGGTGATTA CATCCGTAAA
GATATGGCTC TGGATTGGCG CAACATCCAT CAAGCTGTTG ATGACTCATT AGCGCGCTTA
CAAATCGATA CTATCGATTT GTATCAAGTA CATTGGCCAG ATAGAAACAC CAATTTCTTC
GGCGAAATGA TGTATGAACA CGATGAAGAA GAGCACTACA CGCCTATTTT AGATACCCTT
GAAGCCTTAG CAGAAATCAT TAAGCAAGGT AAAGTGCGTT ATATCGGCAT TTCTAATGAA
ACCCCTTGGG GCTTTATGAA ATACCTTAAA TTAGCTGAAA AGCATGATTT ACCACGTATT
ATTAGTGTGC AAAATCCTTA CAACTTGCTT AATCGCAGCT ACGAAATCGC CATGTCTGAA
ATCAGTTATC GTGAAGAAGT GCCATTATTA GCTTATTCGC CGTTAGCCTT TGGTGCCTTA
ACCGGTAAAT ACGAAAATAA TCAGTGGCCT GAAGGCGCAC GTTTAACGGT ATTTAAACGC
TTTGCCCGCT ACAACAGTAC CCCTATGGCT CTGGAAGCGA CGCAAGCTTA TATCGATTTG
GCCCGTGAAT TTGGTTTGTC GCCCACCGAA ATGGCCTTAG CATTTGTAAA TAGCCGCAAA
TTTGTTGCTG CTAATATTAT TGGTGCAACG GATTTACATC AGTTAAAGCA AAACATCGAC
AGCCACAAAG TCAGCTTATC TGACGAGCTG ATGATAAGAA TTAACGAATT ATCGGCGTTA
TACCGTTTCC CTTGTCCGTA G
 
Protein sequence
MEYQRIAHSN LEVSKICLGT MTWGEQNTQA DAFAQLDYAI GQGVNFIDTA EMYPVPPKAE 
TQGETERIIG NYLKAQGNRD NLVIATKVAA PGGKGDYIRK DMALDWRNIH QAVDDSLARL
QIDTIDLYQV HWPDRNTNFF GEMMYEHDEE EHYTPILDTL EALAEIIKQG KVRYIGISNE
TPWGFMKYLK LAEKHDLPRI ISVQNPYNLL NRSYEIAMSE ISYREEVPLL AYSPLAFGAL
TGKYENNQWP EGARLTVFKR FARYNSTPMA LEATQAYIDL AREFGLSPTE MALAFVNSRK
FVAANIIGAT DLHQLKQNID SHKVSLSDEL MIRINELSAL YRFPCP