| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3173 |
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| Symbol | |
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| ID | 4280075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3800557 |
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| End bp | 3801492 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135991 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_751848 |
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| Protein GI | 114564334 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0439183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTG CTGTATTGGG TGCCGCTGGT GGTATTGGCC AGGCTCTAGC TTTACTGTTA
AAAACTCAAC TGCCTGCGGG CTCAAAGTTG TCTCTATATG ACATCGCTCC TGTTACTCCT
GGTGTAGCGG TTGACTTAAG TCACATCCCA ACAGATGTAG AAGTAAAAGG TTTTGCTGGT
CAAGATCCTA CTGATGCATT AGTTGGCGCA GACGTAGTGT TAATGTCTGC TGGTGTTGCG
CGTAAGCCTG GTATGGATCG TTCAGATCTA TTCAACATCA ACGCTGGTAT CGTGCGTAAC
CTAATGGAAA AAGTGGCTGT AACTTGCCCT AAAGCACTAG TGGGTATTAT TACTAACCCA
GTTAACACGA CTGTAGCGAT TGCTGCTGAA GTATTAAAAA ATGCCGGTGT TTATGACAAA
AACCGTTTAT TCGGTATCAC AACACTTGAC GTTATCCGTA GCGAAACCTT CATCGCTGAG
CTTAAAGGCT TAAACGTTGC TGACGTTAAA GTTAACGTCA TCGGCGGACA CAGCGGTGTG
ACTATTCTTC CACTACTTTC TCAAGTTGAA GGTGTTACTT TCACTGATGA AGAAGTTGCA
GCAATGACAA CTCGCATTCA AAACGCGGGT ACTGAAGTTG TTGAAGCTAA AGCCGGTGGC
GGTAGCGCAA CATTATCAAT GGGCCAAGCT GCATGTCGCT TTGGTTTATC ATTGGTACGT
GGTCTACAAG GCGAAGCTAA CGTTGTTGAG TGTGCCTATG TTGACGGCGG CAGTGAGCAC
GCTACATTCT TCGCACAGCC AATTCTACTT GGCAAAAACG GCGTAGAAAA AGTATTACCT
TACGGTGAAA TCAGCGCATT CGAAGCTAAC GCTCGCGATG CAATGTTAGA CACCCTTAAA
GGTGACATCA AATTAGGCGT TGAATTTGTT AAGTAA
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| Protein sequence | MKVAVLGAAG GIGQALALLL KTQLPAGSKL SLYDIAPVTP GVAVDLSHIP TDVEVKGFAG
QDPTDALVGA DVVLMSAGVA RKPGMDRSDL FNINAGIVRN LMEKVAVTCP KALVGIITNP
VNTTVAIAAE VLKNAGVYDK NRLFGITTLD VIRSETFIAE LKGLNVADVK VNVIGGHSGV
TILPLLSQVE GVTFTDEEVA AMTTRIQNAG TEVVEAKAGG GSATLSMGQA ACRFGLSLVR
GLQGEANVVE CAYVDGGSEH ATFFAQPILL GKNGVEKVLP YGEISAFEAN ARDAMLDTLK
GDIKLGVEFV K
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