| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3172 |
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| Symbol | |
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| ID | 4280074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3799290 |
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| End bp | 3800192 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135990 |
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| Product | esterase, PHB depolymerase family protein |
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| Protein accession | YP_751847 |
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| Protein GI | 114564333 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0370898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTACCGG CTCAAGCAAC AGAAACCCCT TATATCCCAC TCACCGATTT TGGTGATAAT
CCTGGTGCGC TGACAAGCTT TTATCTTCCT GTGACGCAAG CCTCAAATGC TTCTCATGCT
GGGGATTTAT CTTTAGTCGT GTTACTGCAT GGTTGTATTC AAGACGGTGT CGAATTGGCG
GATAAAAGTG GCCTAACGTC ATTGGCGTTA GATAATCATT TTGCGGTTTT AGTGCCACAA
CAAAGCTATG ACAATAACGT AAAGGGTTGT TTCAACTGGT TTGCAAGTCA AGATACGAAG
ATAGACAGTG GTGAAATGTT ATCGATAAAA AACATGATAG TCACCACTCA AGAAAAACTA
GCTGCCAAGC ATGTTTATGT CATCGGGTTA TCAGCGGGTG GCGCCATGGC GAGCGCTGCA
ATCGTCAATT ATCCAAATCT ATTTCAAAGC GGAGCAGTCA TCGCTGGGTT GCCATATCCC
TGTGCCGACA ATTTGATCAA AGCCATCTCT TGTATGAAGC AAGGGCCAGC GCAGTCGGTT
GAAGAATTAG CCCAATTTGC TAAAGCAATA CACCCTCAAC AAACACGTTG GCCTTCATTA
AGTATCTGGA CAGGTGACAG TGACAATGTC GTCAATGCTA ACAATGCGCA AATGCTCGCA
TCTCAATGGC AAGTGTTAAC TCAATCTAAC GCTAAGCCAA CGGTAACAAA TGAATCTGGA
TACAGTATTT CACGCTGGAA AGATCCTCAG AATAAGCAGT CAATTGAACT CGTTACTATT
AAAGATTTTG GTCACGGCAT TGCCGTCAAT CCAGACATAA AACATGGAGG TGAAGAAAGT
GATTATCTGC TTAGGGCACC AATAAGCAGT GTGATAGAAG TGATTAAGCT TTGGGGGCTT
TAA
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| Protein sequence | MLPAQATETP YIPLTDFGDN PGALTSFYLP VTQASNASHA GDLSLVVLLH GCIQDGVELA
DKSGLTSLAL DNHFAVLVPQ QSYDNNVKGC FNWFASQDTK IDSGEMLSIK NMIVTTQEKL
AAKHVYVIGL SAGGAMASAA IVNYPNLFQS GAVIAGLPYP CADNLIKAIS CMKQGPAQSV
EELAQFAKAI HPQQTRWPSL SIWTGDSDNV VNANNAQMLA SQWQVLTQSN AKPTVTNESG
YSISRWKDPQ NKQSIELVTI KDFGHGIAVN PDIKHGGEES DYLLRAPISS VIEVIKLWGL
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