| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3166 |
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| Symbol | |
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| ID | 4280068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3789174 |
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| End bp | 3789974 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638135984 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_751841 |
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| Protein GI | 114564327 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACGT TACAAACTGG ACTAAAAGGG AAAGTGGCAC TTATTACCGG CTCCACTAGC
GGTATAGGCT TAGCGACAGC GCATGTACTT GCCGAACAAG GTTGTCATAT CGTATTGCAT
GGCTTAATGG CGCAAGATGA AGGGCAGACT TTAGCGGCTG AGTTTGCAAC CCAATACCAA
ATAAAGACCT TTTTCAGCAA TGCAGACTTG AGAGACGCTA ACTGCATACA TGCGTTTATG
GACTGTGCGA TGAGTGCATT AGGCAGTATT GATATTTTGG TTAACAATGC TGGGATTCAG
CACACCCAAG ATGTGGCAAA CTTTCCGGTC GAAAAGTGGA ATGACATCAT TGCGATTAAC
TTGTCTTCCG CTTTCCATAC GATTCAACAA GTCGTACCTG CAATGACTGA AAAAAAGTGG
GGACGAATTA TCAATATTGC CTCAGTACAT GGCTTAGTCG CCTCGGCCAA TAAGGTAGCC
TATTGTGCAG CAAAACATGG AATTATTGGC TTAACCAAGG TGGTCGCGAT TGAATGCGCT
GAACAAGGAA TTACCGTCAA CGCGATTTGC CCTGGATGGG TGGATACCCC GCTTATCGGC
AAACAAATTG ACAGCATAGC AAGCGATAAA AATTTGAGTT ATGAAGACGC TAAATATCAA
CTCGTGACAG CCAAGCAGCC GTTACCAGAA ATGCTGGCAC CGAGACAAAT CGGTGAGTTT
GTTTTATTTC TTTGTGGTGG TGCCGCAAGA GGCATTACCG GTGCAGCTTT ACCAATGGAT
GGTGCGTGGA CAGCGCAATA A
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| Protein sequence | MSTLQTGLKG KVALITGSTS GIGLATAHVL AEQGCHIVLH GLMAQDEGQT LAAEFATQYQ
IKTFFSNADL RDANCIHAFM DCAMSALGSI DILVNNAGIQ HTQDVANFPV EKWNDIIAIN
LSSAFHTIQQ VVPAMTEKKW GRIINIASVH GLVASANKVA YCAAKHGIIG LTKVVAIECA
EQGITVNAIC PGWVDTPLIG KQIDSIASDK NLSYEDAKYQ LVTAKQPLPE MLAPRQIGEF
VLFLCGGAAR GITGAALPMD GAWTAQ
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