| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3165 |
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| Symbol | |
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| ID | 4280067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3787982 |
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| End bp | 3788866 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135983 |
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| Product | hypothetical protein |
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| Protein accession | YP_751840 |
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| Protein GI | 114564326 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT CTACGACACC AGAAACCATT ATTGTGATTG GCGCTTCATC GCTTATGGCA
CAAGCTTTTA TTGCCAAAAC CTTTACTCAA CAAGCCTATA CTGATCAAAC CGTTATTCAG
CAAGCATCAA GCCAGCAGTC AAAAAGGCAT GATACTTCGC CGCTACAAAT CATTACGGTT
AGCCGCCAAA ATAAATTGAT ACTACATGAT CTTACGGACA ATATTAGCCA TCATCATTTT
AGCTGTGATT ATCAGCAAGC CTCAATAGAA CAATGTGTTA CTAATATAGC GGCCATTGCA
GGCAAAGTGA CACGAATAGT GATGTGTAAT GGTATTTTGC ACAGTAAAAA CCCGCAAAGC
GCTGATTCAA TTTTAGGGCC TCATTCGGCT AATGATTCAA CATTAATGCC AGAGAAACGC
ATTGAGGATA TTGATGCACT ATCGTTAGAA CAGTTGTTTT ATGCCAACAG TATTGTGCCT
ATGTTATGGC TAAGCGCCCT CACCTCATTA TTGTCACTAC CGCGTCATAA AGTCGCTGGA
GAACAGAAAT GTGTCATCAG TATTTTGAGC GCCCGAGTTG GTAGTATTTC AGACAACCGA
CTTGGCGGCT GGTATGGCTA TCGCGCGTCA AAAGCTGCGT TAAATATGCT GATCAAAACC
ACTGCAGTGG AATATGCCAG ACGACTTAAA CGAGTCAAAC TCATTGCGTT TCATCCTGGC
ACTACTGACA CACCATTATC AAAACCCTTT CAGGCTAACG TCCCCGCAGG CAAGCTTTTT
ACCCCAGAAT TTGTCGCCAG CCAGCTGTAT AACATCATGG CCGATATTGA GCCCAACGGC
GAAGCCAGTT ACTTAGATTG GCAAGGCAAA GAGATTAGTT GGTAA
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| Protein sequence | MSDSTTPETI IVIGASSLMA QAFIAKTFTQ QAYTDQTVIQ QASSQQSKRH DTSPLQIITV
SRQNKLILHD LTDNISHHHF SCDYQQASIE QCVTNIAAIA GKVTRIVMCN GILHSKNPQS
ADSILGPHSA NDSTLMPEKR IEDIDALSLE QLFYANSIVP MLWLSALTSL LSLPRHKVAG
EQKCVISILS ARVGSISDNR LGGWYGYRAS KAALNMLIKT TAVEYARRLK RVKLIAFHPG
TTDTPLSKPF QANVPAGKLF TPEFVASQLY NIMADIEPNG EASYLDWQGK EISW
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