| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3160 |
|---|
| Symbol | |
|---|
| ID | 4280062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3783911 |
|---|
| End bp | 3785218 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638135978 |
|---|
| Product | O-acetylhomoserine/O-acetylserine sulfhydrylase |
|---|
| Protein accession | YP_751835 |
|---|
| Protein GI | 114564321 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2873] O-acetylhomoserine sulfhydrylase |
|---|
| TIGRFAM ID | [TIGR01326] OAH/OAS sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCAG AAAACATGAA GCTGGAATCA TTGGCGCTAC ATTATGGCTA CGAGTCTGAA
GCTACAACTA AAGCCGCTGC GGTGCCGATA TACCAAACCA CCTCATATAC CTTCGATGAT
ACCCAGCACG GTGCCGACCT GTTTGATTTA AAAGTGGCAG GCAACATCTA TACCCGCATC
ATGAATCCTA CTACTAGTGT GTTAGAGCAA CGCTTAGCCG CCATTGAAGG TGGCATCGGT
GCGCTTGCAG TGGCATCTGG CATGGCTGCG ATTACTTACG CGATTCAAGC ATTAACCCAA
GTGGGCGACA ATATTGTCAG TACCAGCCAG TTGTACGGCG GCACATATAA CTTATTTGCC
CATACGCTGC CACGCCAGGG CGTTGAAGTC CGTATGGCGG CGTTTGATGA CTTTGATGGT
CTCGACGCAT TAATTGATGA CAACACTAAA GCGCTATTTT GCGAATCGAT TGGTAACCCA
GCAGGTAATA TTGTCGACTT ACAACGTTTG GCCGATATTG CCCATAAACA CGGAGTGCCA
TTAATTGTAG ATAACACTGT AGCGACGCCA GTGTTGTGCC GCGCATTTGA TCATGGTGCC
GACATTGTTA TTCATTCGCT CACTAAATAC ATTGGCGGCC ACGGCACAAC CATTGGCGGG
GTGATTATTG ACTCGGGTAA ATTTGACTGG GTTGCCAACA AAAAACGTTT TGCGATACTT
AACGAACCTG ATCCGTCTTA TCACGGTGTG GTGTATACCG ACGCATTTGG ACCCGCCGCT
TATATTGGCC GATGCCGCGT AGTGCCACTG CGTAATACTG GCGCAGCCTT GTCACCACAC
AGTTCATTTT TGTTACTTCA AGGCTTAGAA ACTTTAAGTT TACGTATGGA ACGTCATTGC
AGTAATGCGC TTACGCTAGC AGAATATCTA CAGCAGCACC CAAGCATTAG TTGGGTAAAT
TACGCAGCAC TTCCAGACAG CCCGCACCAT GCAACCTGCA AAAAAATCAC TGGTGGTAAA
GCTTCAGGTA TTATTAGTTT TGGCATTAAA GCCGATAACG CAGAAGCCGG TAAAATTGCT
GGTGGTAAGT TTATTGATGC ACTGCAAATG GTGCTACGTT TGGTCAATAT CGGTGATGCT
AAATCGTTAG CTTGTCATCC AGCCAGTACC ACCCATCGCC AGTTAGACAG TGTCGAATTA
GCTAAAGCCG GAGTATCAGA AGATCTAGTG CGCATATCGG TGGGTATTGA GCACATCGAC
GACATCATTG CTGATGTTAG CCAAGCATTA GAGAAAGCAA TTGTGTAG
|
|---|
| Protein sequence | MSAENMKLES LALHYGYESE ATTKAAAVPI YQTTSYTFDD TQHGADLFDL KVAGNIYTRI
MNPTTSVLEQ RLAAIEGGIG ALAVASGMAA ITYAIQALTQ VGDNIVSTSQ LYGGTYNLFA
HTLPRQGVEV RMAAFDDFDG LDALIDDNTK ALFCESIGNP AGNIVDLQRL ADIAHKHGVP
LIVDNTVATP VLCRAFDHGA DIVIHSLTKY IGGHGTTIGG VIIDSGKFDW VANKKRFAIL
NEPDPSYHGV VYTDAFGPAA YIGRCRVVPL RNTGAALSPH SSFLLLQGLE TLSLRMERHC
SNALTLAEYL QQHPSISWVN YAALPDSPHH ATCKKITGGK ASGIISFGIK ADNAEAGKIA
GGKFIDALQM VLRLVNIGDA KSLACHPAST THRQLDSVEL AKAGVSEDLV RISVGIEHID
DIIADVSQAL EKAIV
|
|---|
| |