Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3152 |
Symbol | |
ID | 4280054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3772508 |
End bp | 3773731 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638135970 |
Product | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein |
Protein accession | YP_751827 |
Protein GI | 114564313 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0965219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCAA CTAAAACTTA TGATGTTGCC ATCGTCGGCG GTGGTATGGT CGGGCTTGCA ACCGCAATCG GTTTAGCCAA TGCCGACCTT AATGTGGTGG TTATCGATGC TGGCACAACC CAAGCTGTCA GCGGTGAGCC TAAATTGCGC GTCAGTGCTA TTAACAAAGC CAGCCAACAA CTGCTGGAAA ACCTCGGTGC TTGGCAATAC CTCGACGACA ACCGTGTTAG CCCTTACCAA AAAATGTCGG TATGGGACAA AGACGGCCTA GGTAAAATTG AGTTCGACGC CCACAGTATC AGCGAAGCCT ATTTAGGTTC GATCATTGAA AACGACGCCA TCAGTTACGC CCTTGCCAAA CGCGCCAGCG AAATAAGCAA CATTACCCAT ATTGAAAACC AACGCCTTGA GCGTGTAGCC TTTGGCGAGC GCGAAGCTTG GCTAACCCTA GCCAATGGTG ATAACGTCAG TGCCGCCGTG GTGGTTGCCG CCGACGGAGC TAATTCTTGG GTGCGTCAGC AATGCAGTAT TCCGCTAACC TTCTGGGACT ACGGCCACCA TGCCATTGTC GCGACAGTGC GCACCGAACT TGCCCACGAC GCCACCGCCA GACAAGCCTT TTTACCTGGC GGTCCATTAG CTATGTTGCC ACTGTACGAC GACAATTTAT GCTCCATCGT CTGGTCAGTA TCGCCCGACC AAGCCGAGCA ATTGTTGGCA TTAGACGATA TCGAATTTGG CAAAGCATTA ACTGCCGCGC TCGATGGCCG TTTAGGCATG TGCCAGGTGG TTAGCGAGCG TCAATCATTC TCGCTTCGTA TGCGTTATGC GCGCCACTTT GCCCGCCATC GATTAGTACT GGCTGGCGAC GCTGCTCACA CCATTCATCC GTTAGCTGGC CAGGGGGTTA ACCTAGGCTT TTTAGACGCA GCTAGCATCA TCGACACCTT TACCGAACTG CACCAGCAAG GCAAAGATTT AGGCGAATAC AGCCATTTAC GCGCCCTTGA ACGTTGGCGT AAAGCAGAGG CGATGGAGAT GATTGCCACC ATGGAAGGCT TTAAAAGACT GTTTGCCGGC AGCAATCCGC TTAAAAAAGC CATGCGCGAC ATAGGCCTAA CCCTAGTTGA TAATGTCGCT GGGCTGAAAA CAGTGTTCAT CAAACAGGCT ATGGGTAACA AAATGACATT ACCTAAACTT TGTCGCGAGC CAATTTCATC ATAG
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Protein sequence | MFSTKTYDVA IVGGGMVGLA TAIGLANADL NVVVIDAGTT QAVSGEPKLR VSAINKASQQ LLENLGAWQY LDDNRVSPYQ KMSVWDKDGL GKIEFDAHSI SEAYLGSIIE NDAISYALAK RASEISNITH IENQRLERVA FGEREAWLTL ANGDNVSAAV VVAADGANSW VRQQCSIPLT FWDYGHHAIV ATVRTELAHD ATARQAFLPG GPLAMLPLYD DNLCSIVWSV SPDQAEQLLA LDDIEFGKAL TAALDGRLGM CQVVSERQSF SLRMRYARHF ARHRLVLAGD AAHTIHPLAG QGVNLGFLDA ASIIDTFTEL HQQGKDLGEY SHLRALERWR KAEAMEMIAT MEGFKRLFAG SNPLKKAMRD IGLTLVDNVA GLKTVFIKQA MGNKMTLPKL CREPISS
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