| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3151 |
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| Symbol | gcvT |
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| ID | 4280053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3771194 |
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| End bp | 3772288 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638135969 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_751826 |
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| Protein GI | 114564312 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000770906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAGCA AAACAGTACT TTTTAACAAG CATTTAGAAT CTAAAGCCAA GATGGTTGAT
TTCCACGGTT GGGAAATGCC GATTAACTAC GGCTCTCAAA TCGAAGAACA TCACGCAGTA
CGTCAAGACG CAGGCATGTT CGACGTGTCG CACATGACCG TAGTTGACGT TACTGGCAGC
GATGCTTGTG CCTTCTTACG TAAGTTACTT GCTAACGATG TCGCCAAGCT TACCGTACCT
GGTAAAGCCC TTTACGGCGG AATGCTAGAC GAAAACGCTG GCATCATCGA CGACCTTATT
ACCTACTACT TAACCGACAC CCATTACCGC GTAGTGGTTA ACTCCGCTAC TCGCGACAAA
GACCTCGCCT GGATCAACAA ACAAGCCGCA GCATTTGATG TTGTTGTGAC TGAACGTCCA
GAGCTTGCGA TGATTGCCGT GCAAGGCCCT AATGCTAAAG CCAAAGCCGC TACTGTATTT
TCTGCTGAGC AAAACGCTGC CGTTGAAGGC ATGAAGCCAT TCTTTGGTGT GCAATCAGCC
AGCTTATTTA TTGCCACAAC CGGTTACACC GGCGAAGCGG GCTACGAAAT CATTGTTCCA
GAAACCGAAG CAGAAGCCTT ATGGCAAGCA CTACTAGATG CAGGCGTTAA GCCATGTGGT
TTAGGTGCAC GTGACACATT ACGCTTAGAA GCGGGCATGA ACCTATACGG TCAAGACATG
GACGAGTCAA TTAATCCATT AGCCGCTAAC ATGGGCTGGA CTGTAGCGTG GGAGCCAAGC
GAGCGTGACT TTATTGGCCG TGATGCACTT ACCGCTATTA AAGCGGCTGG CACAGACAAA
TTAGTCGGCT TAGTCATGGA AGAAAAGGGC GTCTTACGCC ACGATATGGC AGTATTTTTT
ACCGACGCAG ACGGTGTTGA GCACCAAGGT GTGATCACCA GCGGTTCGTT TTCGCCAACA
TTAGGCTATT CTATTGCCAT GGCCCGTGTG CCTAGTGGTA TTGGTGCCAT CGCTGAAGTT
GAAATGCGTA AAAAGCGTGT TAACGTAAAA GTCATCGCTC CAAGTTTTGT ACGTAACGGT
AAGCAAGCTT TCTAA
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| Protein sequence | MASKTVLFNK HLESKAKMVD FHGWEMPINY GSQIEEHHAV RQDAGMFDVS HMTVVDVTGS
DACAFLRKLL ANDVAKLTVP GKALYGGMLD ENAGIIDDLI TYYLTDTHYR VVVNSATRDK
DLAWINKQAA AFDVVVTERP ELAMIAVQGP NAKAKAATVF SAEQNAAVEG MKPFFGVQSA
SLFIATTGYT GEAGYEIIVP ETEAEALWQA LLDAGVKPCG LGARDTLRLE AGMNLYGQDM
DESINPLAAN MGWTVAWEPS ERDFIGRDAL TAIKAAGTDK LVGLVMEEKG VLRHDMAVFF
TDADGVEHQG VITSGSFSPT LGYSIAMARV PSGIGAIAEV EMRKKRVNVK VIAPSFVRNG
KQAF
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