| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3120 |
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| Symbol | |
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| ID | 4280023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3731139 |
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| End bp | 3733397 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135939 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_751796 |
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| Protein GI | 114564282 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAA TTAATTGGTG GCACAGTTTA CGGGCACAGA GTTTTATTGC CGTAATGGCG
TTTGGTTTTT TACTTGCCTG TTTATTTATT TTTTATGCGC TGCCAGAGCA AGCCCGCTGG
GTGAATGATG ATCTCTCGAA AACGGCGCAG CGATCATTAC AACAACTCTC TACCTCTGTT
AAAACGCCTT TGCTTACCCG CCAATACGCT GAGCTTTACG AGCAAATAGA TAACCAATTA
GACATTCAAC CTAATTGGAA GGCCATTAAA ATAGTTGATA CGGCAACTGG TAATCAATTG
TATCCGCTTG ATGTGTGGAA CGGGGCAACC CAAAGCGGTG ACATGCTACT CAGCCAACAA
ATTATGTTTT TAGAAAAATC ATTAGCAAGC ATTACGCTAG TGGTTAACTT TACCAATGAA
ATTAATGAAT CATCAAAGCT GCATTACACG CTCATATACA TTCAATTTAT GATTCTGGTT
TTATTTTTTA TGGCGCTAGC TTGGTTGGTC GATTATAGAA TTACTAAACC ATTACGCTCA
TTAGAATTTG CATTTGCACA GCTGGCAAAA GGTGATTTTG ATTGTCATGT CGATAAGCAC
CAAAATAACG AAGTGGGCAG TGTGATTAGT GCGTTTAATC ACATGGCAAC CGAGGTCGCG
AGTAATCATC AAAAATTAAA TACCCTGCGA ATACAGGCTG AGTCGGCAAG TAAAGCAAAG
TCAGATTTTA TGGCCAGCAT GAGCCACGAA TTGCGTACAC CGTTAAATGC TATTTTAGGG
TTAGCACAGT TATATGAATA TGATGTTCTT GCTAATAAAG TCCAAAAAGA CAATGCTAAA
AGTATCTATC GGGCTGGTGA GCATTTATTG TTACTAATTA ATGATGTGCT TGATTTAACA
GCGATTGAGT CGGGTAATAT GCAGTTTAGT TTTGACTATG CATCAATTAA ACGTGTTGTT
GAAGAGTCTG TTGCGCTGGT GAGTGAATTG GTAAAGGCAC AGTCGATGAC GATTCATACA
GAAGGCTTTA ATGAGCTTGA AGGACTTTGT TTTTATATCG ATGAGCGTCG TTTTAAGCAG
GTAATGTTAA ATTTGCTCTC CAATGCCATT AAATATAATA AACCCCACGG CGATATTTTT
ATTAGCTGCA GCGTATCAAG CAATAACCAA TGCACAATTA ACGTAGCAGA TACCGGTTAC
GGCTTTGCTG CTGATGACGT TTCTCGGTTA TTTAAGCCCT TCGATCGCTT AGGTGCCGAA
ACCAGTAATA TTAATGGCAC GGGTATTGGA TTGGTTATTA CCCGAGAATT AGTTGAGCGA
ATGCAAGGCG AGATAAGGGT ACAAAGTGAA CTAAATAAGG GCTCGTGTTT TAGTTTAATT
TTTAATGGTT TTAAGCAAGC CGATGTACCC ATTAAAACTA ACTTACTGGC TAAAACAGAC
TCTACAATTC AATCAGATAG AACAGACATC ACCGAACAAC ACGTTTCAGC AGAGACCTTA
CCTATATTAG AAGTGCTGGT GGCTGAAGAT CAGGTGACTA ATCAGCTAGT GTTAAAGCAA
CAATTAACCT TGCTTGGGGT ACATTCAACG TTTGTGAGTA ATGGCGAGCA AGCTTGGCAA
ACACTGCAAG ATAAACGTTT TAATATATTG TTAACCGATA TTCAAATGCC AATTTTAGAT
GGTTTAGGCC TGGCTAAAAA GATACGAGCA GATGAACGAT TTAAAGATTT AGCCATCATT
GCGATTACAG CGAACATTAT TAAAGAGAAT ATTGATGCTT GTTACGATGC CGGTATGAAT
GGTTTTTTAA CCAAACCCGT TGAGTTGGCT AAGCTTAAAT CGCTTTTAAT GGAGCACTCA
GCAACCATGG TTAATGCTCA TATTGAAGCT AAAAAACCGT CAGAGGTTGC GTCTGATTCA
TTTGATCAGT TAGATCTAGC ATTATTAAAT GCGATGCTAG GTGATGATCC CACGGTGCAT
TGCATGGTGT TTAATGCCTT TTTACAAACG GCTGGTGAAC AAGTTAAGTT AATCAGTGCG
TATGCGACTA GTGAGAACTA CGCCGATTTA TCATTTCAAG CCCATGGTTT AAAGTCGTCA
TCAAAATCGG TTTCGGCATT ATTGTTAGCC GACATTTGTC AGCAAGTTGA AACACTGGCT
ACCAATGGCA GCGTTACCGC TGAGCACGTG AGTGACTTAG AACAATGCTT TAACGAAGTC
GTGGTTCAGT TAACACGTTA TTGTGAATAC TATGAATAA
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| Protein sequence | MLKINWWHSL RAQSFIAVMA FGFLLACLFI FYALPEQARW VNDDLSKTAQ RSLQQLSTSV
KTPLLTRQYA ELYEQIDNQL DIQPNWKAIK IVDTATGNQL YPLDVWNGAT QSGDMLLSQQ
IMFLEKSLAS ITLVVNFTNE INESSKLHYT LIYIQFMILV LFFMALAWLV DYRITKPLRS
LEFAFAQLAK GDFDCHVDKH QNNEVGSVIS AFNHMATEVA SNHQKLNTLR IQAESASKAK
SDFMASMSHE LRTPLNAILG LAQLYEYDVL ANKVQKDNAK SIYRAGEHLL LLINDVLDLT
AIESGNMQFS FDYASIKRVV EESVALVSEL VKAQSMTIHT EGFNELEGLC FYIDERRFKQ
VMLNLLSNAI KYNKPHGDIF ISCSVSSNNQ CTINVADTGY GFAADDVSRL FKPFDRLGAE
TSNINGTGIG LVITRELVER MQGEIRVQSE LNKGSCFSLI FNGFKQADVP IKTNLLAKTD
STIQSDRTDI TEQHVSAETL PILEVLVAED QVTNQLVLKQ QLTLLGVHST FVSNGEQAWQ
TLQDKRFNIL LTDIQMPILD GLGLAKKIRA DERFKDLAII AITANIIKEN IDACYDAGMN
GFLTKPVELA KLKSLLMEHS ATMVNAHIEA KKPSEVASDS FDQLDLALLN AMLGDDPTVH
CMVFNAFLQT AGEQVKLISA YATSENYADL SFQAHGLKSS SKSVSALLLA DICQQVETLA
TNGSVTAEHV SDLEQCFNEV VVQLTRYCEY YE
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