| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3114 |
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| Symbol | |
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| ID | 4280017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3725052 |
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| End bp | 3726479 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135933 |
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| Product | major facilitator transporter |
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| Protein accession | YP_751790 |
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| Protein GI | 114564276 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGTTT TCTTGTCTCG TACCCGTGAA GCGTTATCGG TTTACTACCA CAAACGAGTA
TTTATTTTAC TCTTGCTGGG GTTTTCTGCC GGCTTACCAT TAATGTTAGT CTTTTCGACC
TTAAGCTTTT GGTTACGTGA AGCAGGCATC GACCGAGCGG CGATTGGTTA TTTTAGCTGG
ATAGCACTAA CGTATGCATT TAAATGGGCA TGGTCACCAT TAGTCGATCG TATGTCATTG
CCCTTTTTTA CCCGCTTTTT AGGAAGACGA CGCGGATGGA TGCTGTTCGC ACAACTGTGC
TTAGTCGGCG CCATACTCGG TATGTCTGTT AGCGATCCAG TGGTTAATCT TGAACGTTTG
GCCTTATGCG CCCTACTTTT GGCATTTGCC TCCGCCACCC AAGATATTGT TATCGATGCT
TTTCGGATTG AATCCGCCCC AGAAAAAATG CAAGCAGCGC TTGCTGCTGC GTACCAAGTC
GGTTATCGCA GTGCGATGAT CATCGCCACA GCAGGCGCAT TAACCATTGC AGCTTGGGTG
TCTCCTGGCG ATGATGCTTA CAACTTAGAA GCTTGGCAGA CCGCCTACTT TGCCATGGCG
ATGTTAATGG GTGTTGGTAT TATTACCACG CTATGCAGTA AAGAACCGCA AGTCGATACC
AAACAGGCTG ACGATAAAGA ACGCCTATTA AGAGCCGAGT TTGCTGCCAA ATACCCTGCT
AAAGTCGCAG GAGCATTAGC CTGGTTATAC AGCGCAAGTG TATTGCCTTT TATTGACTTT
TTTAAGCGTT ATGGCAAAAG CGCTATTCTC ATTTTGTTGT TAATCTCGTG CTATCGCATT
TCCGACATTG TCATGGGTAT TATGGCAAAT GTGTTTTATG TTGATATCGG GTTTAGCAAA
GAAGAAATCG CTTTTATCAG TAAAGTCTAT GGTTTGATCA TGACCTTAGT CGGCGCCGCT
TTTGGTGGTG TGTTGCTGAT GCGTTATGGC ACCATGAAGA TTCTATTCTT GGGTGCCTTG
TTAGTCGCGG TCACTAACCT GCTGTTTGCT TGGCAAGCGT ATATTGGCTA CAACGTGCCA
TTTTTAACCT TAGCCATATC GGTAGATAAT TTTAGTGCTG GTATCGCAAC CGCAGCGTTT
ATCGCTTATT TGTCCAGCTT AACCAGTAGT GGATATAGTG CGACACAATA CGCGTTATTG
TCTTCGATTA TGTTGTTGTT CCCTAAGTTT ATCGCAGGAT TTTCGGGCTT GTATGTTGAT
GCTTTTGGTT ACATCAATTT CTTTATTGCA GCGAGTTTGA TTGGCTTTCC GGTGTTGCTA
TTAGTGGTGT TGGTGAATCG ATCGCAAAAC CAAGTGTTGA TTGCCAATGC GGCATCAACA
GAGGGATCTA TCGATGTGTC GACAGATGTT GGTAAACCAC CACTGTAA
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| Protein sequence | MSVFLSRTRE ALSVYYHKRV FILLLLGFSA GLPLMLVFST LSFWLREAGI DRAAIGYFSW
IALTYAFKWA WSPLVDRMSL PFFTRFLGRR RGWMLFAQLC LVGAILGMSV SDPVVNLERL
ALCALLLAFA SATQDIVIDA FRIESAPEKM QAALAAAYQV GYRSAMIIAT AGALTIAAWV
SPGDDAYNLE AWQTAYFAMA MLMGVGIITT LCSKEPQVDT KQADDKERLL RAEFAAKYPA
KVAGALAWLY SASVLPFIDF FKRYGKSAIL ILLLISCYRI SDIVMGIMAN VFYVDIGFSK
EEIAFISKVY GLIMTLVGAA FGGVLLMRYG TMKILFLGAL LVAVTNLLFA WQAYIGYNVP
FLTLAISVDN FSAGIATAAF IAYLSSLTSS GYSATQYALL SSIMLLFPKF IAGFSGLYVD
AFGYINFFIA ASLIGFPVLL LVVLVNRSQN QVLIANAAST EGSIDVSTDV GKPPL
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