| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3112 |
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| Symbol | |
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| ID | 4280015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3723676 |
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| End bp | 3724260 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135931 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_751788 |
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| Protein GI | 114564274 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAAAT GGTTATCCAC TTGCCTACTG TTATTGACCA GTTTAAGTTC CAGCGCTGCG
GTCGACATTC AAAAAGACAC TTTATATCCA CAAGTAGAGT TGGACACCTC TATGGGGAAA
ATAGTGCTTG AGTTAGATCG CACTCGTGCA CCACTTACCG TAGATAACTT TTTAACCTAT
GTGGTTAAAG GCGAATATGA CAATACTATT TTTCATCGTG TGATTGCCGA ATTTGTGGTT
CAAGGTGGTG GGTTAACCAC GAAATTAGAA GAACGCCCTT CGCTAGAGCC TGTTGTAAAT
GAGTCCGGTA ATGGTTTATC AAACTCCCTT GGCACAATTG CCATGGCTCG AGATAACGAT
CCTCATTCAG CAACACGTCA GTTTTACTTC AACCTAGGTA ACAATAAAAA ATTAGACCCT
TCTAAACGTC GTTGGGGCTA TACCGTTTTT GGTGAAGTGA CTCAGGGGAT GGATGTATTA
GAAGCCATTT CATTGGTACC AACTGAACAT AACACCACCC TAAACTGGCC CGATTTTCCG
GTTAATACTG TCATGTTGAA AAAAGCGACT CTACTGCCTC GCTAA
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| Protein sequence | MMKWLSTCLL LLTSLSSSAA VDIQKDTLYP QVELDTSMGK IVLELDRTRA PLTVDNFLTY
VVKGEYDNTI FHRVIAEFVV QGGGLTTKLE ERPSLEPVVN ESGNGLSNSL GTIAMARDND
PHSATRQFYF NLGNNKKLDP SKRRWGYTVF GEVTQGMDVL EAISLVPTEH NTTLNWPDFP
VNTVMLKKAT LLPR
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