| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3109 |
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| Symbol | |
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| ID | 4280012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3720639 |
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| End bp | 3721517 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135928 |
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| Product | sterol desaturase family protein |
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| Protein accession | YP_751785 |
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| Protein GI | 114564271 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATGG ATTTACTGAT AGCTCACCCA GAGTGGTTAT TACTGGTGTT AGCCCCGATT
TTTTTCGGCT GCATTTTACT GGAATGGTGG TTTGGTGTTC GCGCCCAGCG ATTACCGAGT
AATGCTCAAT ATCGCCCTGC CGAAGTATTG TGTAATTTTG TCTTGGCAGG TATGCACCAA
GTGGCGGATA TCATCGCTGG CTTGTTTATT GCGAAGATAT ATTTACACTT TTTCGGCTGG
CGCTTATTTG ATATTGAAAT GACATTATTC ACTTTTGGTT TATTGCTCAT TGCTCAAGAC
TTTTGTTATT ACTGGTTCCA TCGTGCTAGC CATCGTATTC GCTGGATGTG GGCTGCGCAT
GTGGTGCATC ACAGTTCAGA AAACATGAAT TTCAGCACCG CATTTAGACA AAGCTTAATG
TACCCATTGG CAGGAATGTG GCTGTTTTGG TTGCCTTTAG TGGTGATTGG CTTTGATCCT
AACTGGGTGG TGTTTGCAGT ATTGCTTAAT CTGGGATTGC AGTTTTTTGT TCATACCCAA
GCGATTAAGT CGTTAGGGCC GCTAGAATTG ATTTTTAATA CGCCGTCCCA TCACCGCGTG
CATCATGGAC GTAACCCACA ATATATCGAC AAAAATTATG CGGGAGTGCT GATAATTTGG
GACAAAATGT TTGGTACTTT TGAGCCTGAG GTTGAAACTG TGCAATACGG CATCACTAAG
CCGGTAAACA GTTTTAACCC GTTAGTGGTA ACGTTTAGTG AATGGCGCGA CATGTGGGGT
GATGTTACCC AAGCGCAATT ATCACTAAAA CAACGTTTAC GGATATTATT TGCACCGCCT
TCAACACATC AACAGTCATC CACTAAAACC GATATTTGA
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| Protein sequence | MDMDLLIAHP EWLLLVLAPI FFGCILLEWW FGVRAQRLPS NAQYRPAEVL CNFVLAGMHQ
VADIIAGLFI AKIYLHFFGW RLFDIEMTLF TFGLLLIAQD FCYYWFHRAS HRIRWMWAAH
VVHHSSENMN FSTAFRQSLM YPLAGMWLFW LPLVVIGFDP NWVVFAVLLN LGLQFFVHTQ
AIKSLGPLEL IFNTPSHHRV HHGRNPQYID KNYAGVLIIW DKMFGTFEPE VETVQYGITK
PVNSFNPLVV TFSEWRDMWG DVTQAQLSLK QRLRILFAPP STHQQSSTKT DI
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