Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3102 |
Symbol | |
ID | 4280005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3710884 |
End bp | 3711624 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638135921 |
Product | GntR domain-containing protein |
Protein accession | YP_751778 |
Protein GI | 114564264 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACC GTCGTTTATT TTGGCGAATA GTCGATACGA TTGAAGCCGC TATCGCCAGT GGCGAGTATC CGGTAGGCAG TCGTTTACCC CCAGAGCGTG AGCTTGCTGA AAAGTTTGAA GTAAGCAGGC CAACTATTCG TGAAGCTATT ATTGCACTAG AAGTGCGTGA AAAAGTGGAA GTGAAAACGG GTTCTGGCGT GTACGTGGTT GATCATCAGC AAAAACCGGT AGCGGTTAAT AATGTTAACG CATTTGAATT AACCCAAGCA CGTGCTTTAG TTGAAGGTGA AATAGCTGCT TTAGCAGCAA AAACCATTAC TGCAGAAGAG CTTGAAAAAC TCCATGAAAC ATTAGTAATG ATGAAAGATA TGCAAAATGT CGAAGAAGCA GACGAGCTGT TTCATCAGAT CATCGCATAT TCTACTCGTA ACGGCGCGTT GATAAATTTG TTTGAAAACA TGTGGGCACT GCGTTCATCA AGTAATGAAA TCATTGAAGA TTATAATATT GTTTGTAGCA CAGACAATAA TAAAACCTTA GCAGAACATA CCGCAATTTA TCAGGCATTA TCACTGCACG ATGCCGCCGA GGCTCGTTTA GCAATGCATA AGCATTTTAA TCGCTTAATC AATGTGTTGT TTGATAAATT AGAACAGCAG GCATTAGAAG AAGTTCGTCG GAAAAATAGT GCTAATCGAG ACTTGTATTC AATTGAGAGT TTAGTAAAAA CAAAAGGTTA A
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Protein sequence | MKNRRLFWRI VDTIEAAIAS GEYPVGSRLP PERELAEKFE VSRPTIREAI IALEVREKVE VKTGSGVYVV DHQQKPVAVN NVNAFELTQA RALVEGEIAA LAAKTITAEE LEKLHETLVM MKDMQNVEEA DELFHQIIAY STRNGALINL FENMWALRSS SNEIIEDYNI VCSTDNNKTL AEHTAIYQAL SLHDAAEARL AMHKHFNRLI NVLFDKLEQQ ALEEVRRKNS ANRDLYSIES LVKTKG
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