| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3098 |
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| Symbol | |
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| ID | 4280001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3705496 |
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| End bp | 3707316 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135917 |
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| Product | lipid ABC transporter ATPase/inner membrane protein |
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| Protein accession | YP_751774 |
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| Protein GI | 114564260 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGTTA ATACTGTGAC GAATCCAACG ACGACTTCAA CAGAGTCTAT ATCTTCTGCT
AAACCTCCTT TAAAACATTC TGTTCTACCT TGGATTTTAC AATTTCTGTC TCCTTATCGT
ACGAAGGTAG TGGCGGCGAT TGTATTTCTA TTTATTGGAT CGCTTGCATG GCTATCGCTT
GGGCAAGGGG TGCGGTTAAT GGTCGATGAA GGATTTATTG CCGATAATGC AGGGCGATTG
AATGAGATCA TGTTGTTTAT TATTGCTATT ACAGCAATCA GTGGAACTGC GGTTTTCTGT
CGTTTTTATC TGATGACTTG GCTTGGTGAG CGGGTTAGTG CTGATATTCG GTTACAGGTT
TACAATCATT TATTGTCGTT ATCGCCAGCT TTTTTTGCGA CTCAGCGTAC CGGTGAGGTT
ATTTCACGTT TTACGGCAGA CAGTACTTTG TTACAAAGCG TTGTCGGGTC AAGCTTATCT
ATGGCGTTGC GTTCAAGTGT GACCGTGATT GGTGGCATTG TTATGATGGC ATTTACCAGT
GTTAAGTTGA CGGCATTAGT GCTGCTAGCC GTTCCTTTGG TATTAGGCCC GGTGATCTTT
TTTGGCCGAA AAGTCAGAAC CTTGTCGCGT AAAAGTCAAG ATAGGGTAGG CGATCTTGGC
GCTTATATTG ATGAAACATT GCATGAAATT CATACTGTTC AAGCGTATAC CCATGAGTCT
AAAGACCGCC AGCTATTTGC TGACAGAGTC GAGGCGGTTA TGGATGTGGC TAAAGGCCGT
ATTATGTATC GTGCGCTGCT TATTTCAACG GTGATGTTTT TAAGCATTGC TGCAATTGCT
TTTGTTACAT GGATTGGGGC GCAAGATGTG ATGTCTGGCA GTATCACCGG TGGCGAGCTG
TCTGCGTTTA TGTTTTATGC CGTAATGGTT GCAGGTGCTG TAGCCACTAT CAGTGAAGTG
TTTAGCGAAA TTCAACGAGC TTCTGGTGCA GCAGAGCGTT TAATTGAGTT AGTCAAAACA
CCGATTGATA TACCCGAGCA AGTGACCCCC AACCAAGTAG TGCTACCTGT TAAAGGTTTA
CTTAGTTTTG ATAACGTATG CTTTGCTTAT CCGTCAGATC TTGAGCAAGA CGTGATCCGC
CAGTTGTCGA TGTCGATTAC TCCTGGTGAA AGAGTCGCTT TAGTGGGGCC TAGTGGAGCA
GGCAAAAGCA CCTTATTTGA ATTGATGATG CGTTTTTACC AGCCTAAACA AGGACGGATA
TTATTAGATG GTATTGATAT TTCTACTTTG GCATTGGCAG ATTTACGCCA ACAGTATGCA
CTTGTACCGC AAGAGTCGGT GATTTTTGCC ATGAACGTAC TCGATAATGT GCGCTATGGC
CGCTTAGACG CCAGCGATGA AGAGGTAAAA CAGGCTTGCA TTGCGGCTAA AGCGGATGAG
TTTATTCGAG AATTTACTGA TGGTTATTCG ACTTATTTAG GTGAACGTGG CGTGCGTTTG
TCTGGTGGGC AAAAGCAACG TATTGCTATC GCAAGAGCGA TTCTTGCCGA CAGACCAATA
TTACTGCTTG ATGAAGCGAC GAGTGCGTTA GATGCGATAA GCGAAATCAA AGTAAAACAG
GCTCTGGATT CATTAATGGC CAAACGTACA ACAGTGATTA TTGCTCATCG TTTAGCTACC
GTTATCAATG CAGACCGGAT TTTCGTGATA GATAAAGGAC AACTAATTGC CAGTGGTACT
CACAACGAAT TAATGGCCAG CAATGAGCTA TATCGCGAAT TTGCCAGTTT ACAGTTATTG
ATGGATAACG AGCCGTCATA A
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| Protein sequence | MLVNTVTNPT TTSTESISSA KPPLKHSVLP WILQFLSPYR TKVVAAIVFL FIGSLAWLSL
GQGVRLMVDE GFIADNAGRL NEIMLFIIAI TAISGTAVFC RFYLMTWLGE RVSADIRLQV
YNHLLSLSPA FFATQRTGEV ISRFTADSTL LQSVVGSSLS MALRSSVTVI GGIVMMAFTS
VKLTALVLLA VPLVLGPVIF FGRKVRTLSR KSQDRVGDLG AYIDETLHEI HTVQAYTHES
KDRQLFADRV EAVMDVAKGR IMYRALLIST VMFLSIAAIA FVTWIGAQDV MSGSITGGEL
SAFMFYAVMV AGAVATISEV FSEIQRASGA AERLIELVKT PIDIPEQVTP NQVVLPVKGL
LSFDNVCFAY PSDLEQDVIR QLSMSITPGE RVALVGPSGA GKSTLFELMM RFYQPKQGRI
LLDGIDISTL ALADLRQQYA LVPQESVIFA MNVLDNVRYG RLDASDEEVK QACIAAKADE
FIREFTDGYS TYLGERGVRL SGGQKQRIAI ARAILADRPI LLLDEATSAL DAISEIKVKQ
ALDSLMAKRT TVIIAHRLAT VINADRIFVI DKGQLIASGT HNELMASNEL YREFASLQLL
MDNEPS
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