| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3092 |
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| Symbol | |
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| ID | 4279995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3698085 |
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| End bp | 3698645 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135911 |
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| Product | methylation site containing protein |
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| Protein accession | YP_751768 |
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| Protein GI | 114564254 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.751451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAATA TGATGCCATT ACGTAATAAT AAAAGCACCG CTAAAAGTGG TTTTACCCTT
ATTGAACTCG TCGTTGTTAT TATCATACTT GGGATCATCG CTGTTATCGC TTTACCGAAG
TTCATCGATT TAGGCCAAGA TGCTAAAATC GCCAATGTAA AAGCAACTGG CGGAGCATTT
TCTTCAGCAA TAACCTTGGC TCATTTGAAG TGGGCCGCGA TGGGGTATTC TGGCCCAGCA
GATAATTTAG CTATTTTCAG TCAAGCCGGA ACCGATGGCG AACTGGATAT GAACCAATGG
GGCTATCCTG CACAGAATTA TCCACCTTAC GAAGCCTCTC CAAGACTGAA TAACGTTAAT
GACTGCCTTT CCGTCTGGCC TACTCTGTTG CAGGATGGTC CAAGCGTTTC GAGTAGTGCA
GATAAAGATT CATCTGATTA CCAAGCGGAA TATATCAATC CAGATCAATG CCGATATAAC
TACAACTCGC TATCACTTAT GTCGATATAT TATGACTCAC GTAACGGCCA GGTCTTGGTA
GATTCAGATC CCAATAGCTA A
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| Protein sequence | MNNMMPLRNN KSTAKSGFTL IELVVVIIIL GIIAVIALPK FIDLGQDAKI ANVKATGGAF
SSAITLAHLK WAAMGYSGPA DNLAIFSQAG TDGELDMNQW GYPAQNYPPY EASPRLNNVN
DCLSVWPTLL QDGPSVSSSA DKDSSDYQAE YINPDQCRYN YNSLSLMSIY YDSRNGQVLV
DSDPNS
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