Gene Sfri_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3085 
Symbol 
ID4279988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3692661 
End bp3693131 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content42% 
IMG OID638135904 
Producthypothetical protein 
Protein accessionYP_751761 
Protein GI114564247 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATCCT TTCTAAGTTT GTTGCTGCAT GATGCATTTT TTTCGGCGAT ACCTGCGGTT 
GGTTTTGCGA TGGTGTTTAA TGTCCCTAAA CGCTATTTAA TTTATTGTGC CATTGCAGGT
GCTATCGGCC ACAGTTCAAG AACATTTTTA TTACATTTTT CAATGCCAAT TGAATGGGCG
ACATTTATCG CAGCAGCTAT TGTTGGCTTG ATTACTATTC AGTTTGCTAA ACGTCACCTT
GCCCCACCAT TAATGTACGC TGTAGCTGCC ATTATTCCCA TGGTGCCAGG AACGTATGCA
TTCAATACTG TCATAGCATT AATTCAACTC ACGGCACAAA GTCAGGTTAG TCCCGAACTC
ACAGCTCAGG TCATCGTCAA CGGTTTAAAA ACAGTATTTA TTCTAGGCGC GCTGGCCGTA
GGGTTAGCGT TACCAAGTTT GCTTTACTAC CGCACCAGAC CGATTATTTA A
 
Protein sequence
MLSFLSLLLH DAFFSAIPAV GFAMVFNVPK RYLIYCAIAG AIGHSSRTFL LHFSMPIEWA 
TFIAAAIVGL ITIQFAKRHL APPLMYAVAA IIPMVPGTYA FNTVIALIQL TAQSQVSPEL
TAQVIVNGLK TVFILGALAV GLALPSLLYY RTRPII