Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3085 |
Symbol | |
ID | 4279988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3692661 |
End bp | 3693131 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135904 |
Product | hypothetical protein |
Protein accession | YP_751761 |
Protein GI | 114564247 |
COG category | [S] Function unknown |
COG ID | [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATCCT TTCTAAGTTT GTTGCTGCAT GATGCATTTT TTTCGGCGAT ACCTGCGGTT GGTTTTGCGA TGGTGTTTAA TGTCCCTAAA CGCTATTTAA TTTATTGTGC CATTGCAGGT GCTATCGGCC ACAGTTCAAG AACATTTTTA TTACATTTTT CAATGCCAAT TGAATGGGCG ACATTTATCG CAGCAGCTAT TGTTGGCTTG ATTACTATTC AGTTTGCTAA ACGTCACCTT GCCCCACCAT TAATGTACGC TGTAGCTGCC ATTATTCCCA TGGTGCCAGG AACGTATGCA TTCAATACTG TCATAGCATT AATTCAACTC ACGGCACAAA GTCAGGTTAG TCCCGAACTC ACAGCTCAGG TCATCGTCAA CGGTTTAAAA ACAGTATTTA TTCTAGGCGC GCTGGCCGTA GGGTTAGCGT TACCAAGTTT GCTTTACTAC CGCACCAGAC CGATTATTTA A
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Protein sequence | MLSFLSLLLH DAFFSAIPAV GFAMVFNVPK RYLIYCAIAG AIGHSSRTFL LHFSMPIEWA TFIAAAIVGL ITIQFAKRHL APPLMYAVAA IIPMVPGTYA FNTVIALIQL TAQSQVSPEL TAQVIVNGLK TVFILGALAV GLALPSLLYY RTRPII
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