| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3079 |
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| Symbol | ksgA |
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| ID | 4279982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3686969 |
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| End bp | 3687775 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135898 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_751755 |
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| Protein GI | 114564241 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAATA AAGTACATTT AGGCCACACG GCCAGAAAGC GTTTTGGACA AAACTTCTTA
ACTGATCAAG GCGTAATTAG CAGCATAGTC GGCGCTATTG CACCTGATAA TGATCATGTA
ATGGTTGAAA TTGGACCCGG TTTAGGTGCA TTAACTGAAC CTGTTGCTGA TATGATTGAT
AACCTAACCG TTGTTGAATT GGATCGTGAC TTGGTGAAAC GCTTACAATA TCACCCAGTA
CTTAAAGACA AACTGACCAT TCACCAAGGT GATGCGTTAC AGTTTGATTT TGGTCAGTTG
CAACAGCCTG GCAAGAAAAT GAAAGTGTTT GGTAACCTTC CTTACAATAT TTCAACGCCG
CTGATGTTCC ATTTGTTTGA GTTTGCAGAA CAAATAGAAA CGATGCATTT TATGTTGCAA
AAAGAAGTTG TTTTGCGCTT ATCAGCAAGC CCTGGTACCA AAGCTTATGG CCGTTTAACG
GTGATGGCAC AATATTATTG CCAAGTAGTA CCAGTATTAG AAGTGCCACC AACAAGCTTT
ACCCCTGCCC CAAAAGTTGA TTCTGCAGTG ATAAGATTAT TGCCTTTTGA AGTCAAACCT
TGGCCGTGTA AAAATGTCGA TGTATTAAGA CACCTAGTCA CGACAGCATT TAATATGCGC
CGTAAGACTT TGCGTAATAA TTTAAAAACC TTACTGTCAG ATGAAGACTT TGCAGAACTG
CAAATTGATG CGAGCCTGCG GCCAGAACAA ATTAGTGTCC CACAATATGT GGCAATGGCT
AATATGCTGT GTGACAAAAA AGATTAA
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| Protein sequence | MSNKVHLGHT ARKRFGQNFL TDQGVISSIV GAIAPDNDHV MVEIGPGLGA LTEPVADMID
NLTVVELDRD LVKRLQYHPV LKDKLTIHQG DALQFDFGQL QQPGKKMKVF GNLPYNISTP
LMFHLFEFAE QIETMHFMLQ KEVVLRLSAS PGTKAYGRLT VMAQYYCQVV PVLEVPPTSF
TPAPKVDSAV IRLLPFEVKP WPCKNVDVLR HLVTTAFNMR RKTLRNNLKT LLSDEDFAEL
QIDASLRPEQ ISVPQYVAMA NMLCDKKD
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