Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3077 |
Symbol | |
ID | 4279980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3684662 |
End bp | 3685966 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135896 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_751753 |
Protein GI | 114564239 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA GTAAAAAAAT AATTTTTGCA TTACTAGCGT TAGCTATGAG TAACACCAGT ATGGCTGCGC CAATGCCATT AGATCGCGTA TCAGTACAAA TTAATGATGG CATTATTCTT GAGAGTGAAA TCACCAACAT GGTTTCAACT GTTAAAGCCA ATGCTAAAGC AGCGAATCAA ACATTACCAT CTGATGATGC CTTGCGCACT CAGGTAATCG AACGTCTCAT TTTAACTCAT TTGCAAATGC AAATGGCTGA ACGTATCGGC CTGCAGATTG GTGATTTACA ATTAGACCAA ACGATTGAAA ATATTGCTAA AGAACAAAAA GTAACCGTTG CGCAAATGCA GCAGACTATT GAAAGCGAAG GTACGAGCTT CAGTCAATAT CGCGAACAGT TACGTCAAGA AGTCACCCTA GGTGAAATTC AGCGCATTCA AGTGCAACGC CGTATTCAGG TTTCACCACA AGAAATTAGT GGTTTAGTGA AATTGATTCA AGAACAAGGC TTAAAAGATG TTGAGTTTCA AATTGGTCAC ATTCTAATTG AAGTACCAAG CAACCCAACG AGCGAACAAC TTGAAGGTGC TAGCCGCCGT GCAGAAATCG TGCTTAAACG TTTAAACAAT GGCGATGACT TCCGTAGCAC CGCTATTGCG TCTTCATCAG GTCCTAAAGC GCTAGAAGGC GGGATCTGGG ACTTTATGAA CATTAACGAA ATGCCAACCT TGTTTGCTGA AGTTATCAGT AACGCCAAAA AAGGTGACAT AATCGGTCCG ATTAAATCGG GTTCAGGCTT CCATATTATT AAAGTAGTCG ACACTCGTGG TTTACAAACC CAAGAAGTTG AAGAAGTAAA ATCGCGCCAT ATCCTGTTAA AGCCATCTCC GATATTATCG GAAGATCGTG CTAAAGCGAT GTTGGCTAAC TTTTTAGCTC AAGTTCGTGC AGGTGATGCT GATTTTGCTA AATTAGCCAC TCAGTACTCT GAGGATCCTG GTTCTGCAGC TAAAGGTGGT GAGTTAGGTT GGGCAGACCC AAGCATGTAT GTGCCAGAAT TTACTCAAAC ACTAGCCAGT CTTCAGGAAG GCCAATACAG TGAGCCTTTC CGAACTACTC ATGGCTGGCA TGTTGTCCAA CTTGAATCGC GTCGCAAAAC AGATGCAACT GAACAATTTA ACAGTAACCG TGCTCATCAA TTAATCTTCC GTCGTAAGTT TAATGAAGAG TTACAAAACT GGTTAGACGA AATGCGCTCT GAAGCGTATA TCGAAATCGT TGAGCCAGAA AGCAAACGAG GCTAA
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Protein sequence | MKHSKKIIFA LLALAMSNTS MAAPMPLDRV SVQINDGIIL ESEITNMVST VKANAKAANQ TLPSDDALRT QVIERLILTH LQMQMAERIG LQIGDLQLDQ TIENIAKEQK VTVAQMQQTI ESEGTSFSQY REQLRQEVTL GEIQRIQVQR RIQVSPQEIS GLVKLIQEQG LKDVEFQIGH ILIEVPSNPT SEQLEGASRR AEIVLKRLNN GDDFRSTAIA SSSGPKALEG GIWDFMNINE MPTLFAEVIS NAKKGDIIGP IKSGSGFHII KVVDTRGLQT QEVEEVKSRH ILLKPSPILS EDRAKAMLAN FLAQVRAGDA DFAKLATQYS EDPGSAAKGG ELGWADPSMY VPEFTQTLAS LQEGQYSEPF RTTHGWHVVQ LESRRKTDAT EQFNSNRAHQ LIFRRKFNEE LQNWLDEMRS EAYIEIVEPE SKRG
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