Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3072 |
Symbol | |
ID | 4279975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3678517 |
End bp | 3679470 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135891 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_751748 |
Protein GI | 114564234 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.642476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG TGGTATTAGA TGGTTATACA CTTAATCCGG GTGATTTGAG TTGGCAAGCG CTTGAGGCAT TAGGCGAATG TGATATTTAC GACCATACAA CACTCGACCA AATCGTCAGT CGTTGCCAAG GTGCGCACAT CGTACTGACC AATAAAACCC TATTGAGTGC CGCGACCTTA AAGCAACTGC CCGCATTAAC CTATATTGGT GTTCTCGCCA CTGGAACCAA TGTGGTCGAT GTTGATGCAG CAACAGCGCA GGGCATTGTT GTCACTAATA TTCCTGCTTA TGGCCCCGAT GCCGTAGCAC AAATGGTGTT TGCCCATATT TTACATCATA AGCAACAAGT TGCTTTACAT GACCAAGCCG TAAAACAAGG ACAATGGGTA ACGCAACGAG ATTTTTGTTT TACCTTATCA CCCTTAACTT CATTAAAAGG CCTCACGCTG GGTGTTGTAG GTTATGGTGA TATTGGCCAA CAGGTTGCCA ATTTAGGTGT CGCATTTGGC ATGAAAGTGT TGATTACCAG TGCTAAACCT AAAACCAATT TACCTGATGC CATTCAATGG TGCGAACGTG ACATCCTGCT GCAACAAGCC GATATTATTT CGCTGCATTG TCCGCTGATT GCTGCAACCA AATACATGAT CAATAGCGAC AGTTTACGCT TACTTAAACC GGGTTGTTTA TTAGTGAATA CCGCCCGTGG CGATTTGATT AATGAAAATG ATCTCGCTCA ATGGCTTAAC AATGGTAACG GCTTTGCGGC AGTTGACGTG TTATCGACAG AGCCACCCAG TAGCAATAAC CCACTACTGA GTGCAGCCAA CATTACTATC ACGCCGCATA TTGCATGGGC GACATTACAA GCTAGACAAA ATCTGCTTAA TATTGCGGTT GAAAATGTAC GCAAATTTCA ACAAGGTAAA ATGTTGAATC GAATTAACGA CTAA
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Protein sequence | MKIVVLDGYT LNPGDLSWQA LEALGECDIY DHTTLDQIVS RCQGAHIVLT NKTLLSAATL KQLPALTYIG VLATGTNVVD VDAATAQGIV VTNIPAYGPD AVAQMVFAHI LHHKQQVALH DQAVKQGQWV TQRDFCFTLS PLTSLKGLTL GVVGYGDIGQ QVANLGVAFG MKVLITSAKP KTNLPDAIQW CERDILLQQA DIISLHCPLI AATKYMINSD SLRLLKPGCL LVNTARGDLI NENDLAQWLN NGNGFAAVDV LSTEPPSSNN PLLSAANITI TPHIAWATLQ ARQNLLNIAV ENVRKFQQGK MLNRIND
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