Gene Sfri_3069 details

Gene Information

• Locus tag: Sfri_3069
• ID: 4279973
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 3675784
• End bp: 3676419
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638135889
• Product: redoxin domain-containing protein
• Protein accession: YP_751746
• Protein GI: 114564232
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1225] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAAAA CTCTGCTTAT TGCCACCGCA CTTACGTTAA CCAGTTTAGC TAGTGTGGCT 
AAGCCTATTG CCAGTGACGA GAACAATGTC ATGCCACTGC TCAATGGCCA CCAGATACCA 
GCAATAACCC TGCAAGATGT TGATGGTAAA GCGGTTGAAC TCAGTAAACT TGTGGCTCAA 
AAGCCGACTA TATTTTTCTT TTACCGTGGC GGTTGGTGTC CATTTTGTAA TTCGCAAATG 
GGTCAGTTAA AAGCCATTGA ACCAAAGCTG ATTGAGATGG GTTTTCAATT AGTGGGGATA 
TCACCTGACA CGCCAGAAAA GATGCGCGCG TCGATGAATA AACAAGAACT CGATTATTTA 
TTGCTGTCTG ACACCTCAAT GGCGGCATCG CAAGCATTTG GTTTAGCCTA TTACACCAGT 
GCAGATATCA CTAAAAAATA TACTGCCAGT TTAGCGGTAA CCAATGAACT GTTTACTACC 
CCAGCGGGTG ACAAACGTTT AGTGTTACCC GTGCCTGCTG TCTATTTGGC AGATAAAAGT 
GGTTTAATTC ATTTTCAATA TGTGAATCCA AACTACAAGG TTCGCCCTGC GCCAGAGCTA 
ATTTTAACCG CTGCAGAGTT ACTCGTTAAA CCTTAG 

 

Protein sequence

MLKTLLIATA LTLTSLASVA KPIASDENNV MPLLNGHQIP AITLQDVDGK AVELSKLVAQ 
KPTIFFFYRG GWCPFCNSQM GQLKAIEPKL IEMGFQLVGI SPDTPEKMRA SMNKQELDYL 
LLSDTSMAAS QAFGLAYYTS ADITKKYTAS LAVTNELFTT PAGDKRLVLP VPAVYLADKS 
GLIHFQYVNP NYKVRPAPEL ILTAAELLVK P