| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3068 |
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| Symbol | |
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| ID | 4279972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3674357 |
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| End bp | 3675658 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135888 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_751745 |
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| Protein GI | 114564231 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.546349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTCG AATCTTTTAG CTTCGCCCCA GAAATATTAC GCGCGATCGC TGAGTGCGGT
TATCAATCTA TGACGCCAAT TCAACAACAA GCGATTCCGG CAATCCGTCG TGGTGAAGAT
GTCCTAGCAA GCGCTCAAAC AGGCACGGGT AAAACAGCAG CATTTGCACT GCCTATATTA
CAAAGAATGT GTGATAACCC AAAAGAGACG ATGCCGTCTA ACACTCGTAC CTTAATTCTG
ACTCCAACTC GTGAGCTTGC CGCACAGGTT GCAGACAACA TTAGCGCTTA CAGTAAGCAT
CTTAATTTAA CGGTATTAAC CATTTATGGT GGCGTTAAAA TAGATACCCA GTCACAAAAA
CTTAAACGCG GTGCCGACGT TATTGTTGCT ACACCAGGTC GTTTACTTGA ACACATTGTG
GCGTGTAACT TAAGTTTGTC GAATGTTGAG TTTTTAGTAC TCGATGAAGC CGACCGTATG
CTTGATATGG GCTTTAGTGC TGACATTAAA AAGATTCTCC AAGCAGTAAA CAAAAAGCGT
CAAAACATGT TGTTCTCTGC GACCTTCTCT TCTGAGGTTA AAAAGCTGGC GAATGACATG
CTTGAAAAGC CTAAAGTGAT TACTGTTGAT AAACAAAACA CTACTGCCGA CACCGTTAGC
CAGGTGGTAT ATCCAGTAGA GCAGCGCCGT AAGCGTGAAT TAATATCTGA ACTTATTGGT
ACCAAAAACT GGCAACAGGT GTTGGTGTTC ACCGCGACTC GTGACGCAGC AGACAAATTG
GTCAAAGAGC TTAACTTAGA TGGTATTCCA TCGGGTGTGG TTCATGGCGA GAAAGCACAA
GGCAGCCGTC GTCGTGCGTT ACGTGAATTT GTTGAAGGTA AAATTCGCGT ATTAGTGGCC
ACCGAAGTCG CCGCTCGTGG CCTTGATATT AAAAATCTTG AATACGTTGT TAACTACGAT
TTACCATTTT TAGCCGAAGA TTACGTACAC CGTATTGGCC GTACAGGTCG TGCAGGTAAA
ACCGGTGTGG CAATTTCGTT TGTGAGCCGC GAAGAAGAAC GCACCCTAGC TGATATTGAA
AAGCTAATCG GTCAGCCAAT TCGCCGAGTG ACGGTACCGG GTTATGAAGT CGGTAGCCGT
GAAGTACTGC TTAAGCAAAT TGAAAAGCGC CGTAGTTTTG CTAAAAAACA ACAACGTGGT
GATAACGCTG GCGCCCAGAT GATTGCTGAG AAAAACATGG ACGGACGTCG TGTTAAAGTG
GGTAAAGTCA GCAGCACGGT TAAATACAAA AAGATTAAAT AA
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| Protein sequence | MKFESFSFAP EILRAIAECG YQSMTPIQQQ AIPAIRRGED VLASAQTGTG KTAAFALPIL
QRMCDNPKET MPSNTRTLIL TPTRELAAQV ADNISAYSKH LNLTVLTIYG GVKIDTQSQK
LKRGADVIVA TPGRLLEHIV ACNLSLSNVE FLVLDEADRM LDMGFSADIK KILQAVNKKR
QNMLFSATFS SEVKKLANDM LEKPKVITVD KQNTTADTVS QVVYPVEQRR KRELISELIG
TKNWQQVLVF TATRDAADKL VKELNLDGIP SGVVHGEKAQ GSRRRALREF VEGKIRVLVA
TEVAARGLDI KNLEYVVNYD LPFLAEDYVH RIGRTGRAGK TGVAISFVSR EEERTLADIE
KLIGQPIRRV TVPGYEVGSR EVLLKQIEKR RSFAKKQQRG DNAGAQMIAE KNMDGRRVKV
GKVSSTVKYK KIK
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