Gene Sfri_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3065 
Symbol 
ID4279969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3672397 
End bp3672819 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content33% 
IMG OID638135885 
Producttranscriptional regulator, MarR family protein 
Protein accessionYP_751742 
Protein GI114564228 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTATAC AAATCCCAGA TTCTTTTTTA TCGCTTACTC ATACCTTTAA ATCATGTGTA 
AACAAAGAAA TACGTGAAGC AGGTATTGAT ATTGCTCCAA TGGAAATTCA GTCGCTTCAT
TGTATTAATC GCATTGGTAG CTGTACGGCG GCTTATATCT CCGAACAACT AGATAGGGAT
AAAGGGCAAG TAGCTAGACT AGTTAGAGAT ATGCTTAAAA AGAATTTAAT TTATAAAGTG
CTTAATCCAT TGGATAGCAG AAGCCATTTG ATCGAATTAT CTGAATTTGG ACAAGAAATT
TTGAAGCAAT TATTGCATAT TGAAAATAAC ATCATGAAAG TCATGCTGGA TTCAATAACG
GAGAGACAAG TTGATCAATT TAATTCTATA GCATTAGAAA TGGCTCAGAA TCTGAAAAGA
TAG
 
Protein sequence
MTIQIPDSFL SLTHTFKSCV NKEIREAGID IAPMEIQSLH CINRIGSCTA AYISEQLDRD 
KGQVARLVRD MLKKNLIYKV LNPLDSRSHL IELSEFGQEI LKQLLHIENN IMKVMLDSIT
ERQVDQFNSI ALEMAQNLKR