| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3061 |
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| Symbol | |
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| ID | 4279965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3668852 |
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| End bp | 3670162 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135881 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_751738 |
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| Protein GI | 114564224 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TTATCGTTTC TTTGGTGTTG GTGGTGCTAG TGACCATTGC CAGTCTAGGG
TGGTCTATTA GTGAGTTTGC CAGTTTTTAT CATCAAGAAG ATGATCAACC TAATCCGGCC
AATCAGCTTG CCGCGCTAAC CTTAATGGGG ACGGGGTTAG CCAAAACATT AGATAATCAT
CAGCTTCAAA GCCAAGCTTT TCTGACGAGT TGGAATCAAC ATAATATTGA GCAGCTGGCT
TTAATGGGCA GCGTTGAATT TATATTACCG CCGACGCTAA AAGCCCAGTT CGATACCGAT
AAGTTTCTGA TGTTGGAATC CGATGAAGGC ATATCGTTGC ACTATTTATT ATCCAGTACT
GGCCAAGTGC TCAATATCAC TACTCCGTTG ATAATAGAAA ACGATAGTGG TTTGAACCTT
AATAGGCTGT ATACCATGTT GTTTTACCTT GGTGTGGTGC TGATTTTACT GTTGTGGGTG
TCACCGTTGA TTCGCCGTCT GATCAATTTA AGTCAAGCCA CTCAAGCATT TGGTATGGGG
GAATTACAAC AACGGATTGC AGTGAGTAAG ACCTCCTATA TCGGCACTAT TGAAGCAGAG
TTCAACCGCA TGGCTGACCG CATTCAGCAG CTACTCGATG ACAATAAATT GCTGAGCCGC
GCTGTGTCGC ATGATTTAAA AACCCCCATA GCAAGGTTAA GATTTGGCAT TGAAGCATTG
GAAGAAACGC AAAATCCACA GCTAAAAATT AAGTATTTCC AACGCATAAA TCGCGACTTA
GACACCATGG AAGACTTAGT GATGACTTTG CTAAGCTATG CTCGATTAGG CCAAGGTGAC
ATTCCGTTAA ATAGGCAGAC CATAGAGTTA AATGCTTGGT TACAGAATAA AGTATTAGAT
CATGATGATG GTGAACATCA GATTGAATTG TTGTCTATAC CTCAAGCAGT CACAGTTAAT
GTCGATCCTA AATACTTATC TATGCAGATG AATAATCTAC TCAGCAACGC CCAGCGTTTT
AGCTGTTCAC ATATTCGTGT AAGTCTAGTT GTTGAGCATC AAGTGCTGTG GATCCACGTA
GATGATGATG GTCAAGGTAT AGACGAGCTA GAAGCGATGC AAGTGATCAA ACCTTTCGTG
CGGGGTAAAC ACAGCCGCGG CAATATGGGC CATGGCATGG GGTTAGCAAT TGTGGATCGT
ATTGGTTTAT GGATGGGATC AAAGCTTCAC ATTAGCCGAG CGCCAGAATT AGGCGGAGCT
AGGCTATCAC TGGCTTTTGA ATCGTGCTCG ATTTCAGACA GTGCAGTCTG A
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| Protein sequence | MKKLIVSLVL VVLVTIASLG WSISEFASFY HQEDDQPNPA NQLAALTLMG TGLAKTLDNH
QLQSQAFLTS WNQHNIEQLA LMGSVEFILP PTLKAQFDTD KFLMLESDEG ISLHYLLSST
GQVLNITTPL IIENDSGLNL NRLYTMLFYL GVVLILLLWV SPLIRRLINL SQATQAFGMG
ELQQRIAVSK TSYIGTIEAE FNRMADRIQQ LLDDNKLLSR AVSHDLKTPI ARLRFGIEAL
EETQNPQLKI KYFQRINRDL DTMEDLVMTL LSYARLGQGD IPLNRQTIEL NAWLQNKVLD
HDDGEHQIEL LSIPQAVTVN VDPKYLSMQM NNLLSNAQRF SCSHIRVSLV VEHQVLWIHV
DDDGQGIDEL EAMQVIKPFV RGKHSRGNMG HGMGLAIVDR IGLWMGSKLH ISRAPELGGA
RLSLAFESCS ISDSAV
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