| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3038 |
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| Symbol | |
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| ID | 4279942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3645027 |
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| End bp | 3646460 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135858 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_751715 |
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| Protein GI | 114564201 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCTA TGAATAGTTT GATGTGGTTT AGGCAAGATT TACGGGTGGC AGATAATCCG
GCTTTAGTGG CGGCATGTGA GTTTGCTAGC AGTAATCGTG GTCATGTTCG AGCTGTGTAT
TTTGTCACGC CAGCACAATG GGCACAACAT GATGTTGCGC CGATACAAAT TGATTTTATC
CAGCGACATG TCAATTTGTT AGCACAGGCA TTGGCGGTGT TAGGTATTCA TCTAGATGTG
TTGCACGCAC AAGACTTTGA TGAAGTACAA ACCCTGTTAG CCGCTTATAT CGCACAGCAT
GATATTGCCG CTGTGTATGC TGCCAATGAG CCAGAAATAA ATGAACGTCG TCGAGACCGC
GCATTAATTG ATAGCGGTGT ACCCCTAACG TTAATCGACC AAGATTGCGT ATTAGCAGCT
GGACAAGTGA AAAACTTGGC TGGTGATATG TATAAGGTAT TCAGCCCTTT TGCTAAAAAG
TGGAAAAGCA TTGCTGGCCA GCGTGCGATT GTTCCCGTTG CGGTGCCTGC GCCAATCGCT
GCTGTACTGG CAACGCCTAA TGAAGTGGTA TTTAATTGCT ATAAAATGTC TAGTGAGCAA
TGGCCTGCTG GAGAAGGGGC TGCAAAGCGA ATACTGGATC AGTTTTTAGC AAACCAAGTT
GCAGATTATC AAGCCGAAAG GGATTTTCCT GCCCTTGAAG GAACCAGTCG ATTATCGCCT
TTTTTAGCTA TTGGGGTTAT TAGTTCACGT CAATGTGTCG CAGCCATATT AGCGCGTTAT
CCCCAAGCTT TAGTCGAAGA CACTTGTCCA GCAAAAACGT GGTTAAATGA ATTAATTTGG
CGTGAGTTTT ATCGCCATTT ACTGGTGGCG TTTCCACGCT TATCCATGAA CCATAACTTT
AATGAGTTAG GCGACGGCAT TGTGTGGCGT AATAATCTTG CTGAGTTTAC CGCCTGGTGT
GATGGCCAAA CAGGCTATCC AATTATTGAT GCTGCTATGC GCCAATTAAA TCAAACCGGT
TGGATGCATA ATCGATTACG CATGGTGGTA GCTAGCTTTT TAACTAAACA CCTATTGGTT
GATTGGCGTT GGGGCGAGCG ATATTTTAGG CAAAAACTAA TTGATGGTGA CTTAGCCGCT
AATAATGGTG GTTGGCAATG GTCAGCCGGA ACAGGCTGCG ATGCGCAACC TTATTTCCGC
GTGTTTAATC CAATGACCCA AAGCAGTAAG TTTGATCCAG ATGCAAGTTT CATAAAGCGT
TATGTTTCCG AGTTATCAGC ATGGTCATTG GCCGATATTC ATCAACCCAA AACCATCAAT
GTTAATGACT TATTTGCACA ACGCCAGGAT GATCGATACC CACAACCTAT TGTCGAACAC
AAGATGGCAC GCTTGCGGGC GATAGAGGTA CTAAGCGCAT TAAAGCGTGG TTAA
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| Protein sequence | MTSMNSLMWF RQDLRVADNP ALVAACEFAS SNRGHVRAVY FVTPAQWAQH DVAPIQIDFI
QRHVNLLAQA LAVLGIHLDV LHAQDFDEVQ TLLAAYIAQH DIAAVYAANE PEINERRRDR
ALIDSGVPLT LIDQDCVLAA GQVKNLAGDM YKVFSPFAKK WKSIAGQRAI VPVAVPAPIA
AVLATPNEVV FNCYKMSSEQ WPAGEGAAKR ILDQFLANQV ADYQAERDFP ALEGTSRLSP
FLAIGVISSR QCVAAILARY PQALVEDTCP AKTWLNELIW REFYRHLLVA FPRLSMNHNF
NELGDGIVWR NNLAEFTAWC DGQTGYPIID AAMRQLNQTG WMHNRLRMVV ASFLTKHLLV
DWRWGERYFR QKLIDGDLAA NNGGWQWSAG TGCDAQPYFR VFNPMTQSSK FDPDASFIKR
YVSELSAWSL ADIHQPKTIN VNDLFAQRQD DRYPQPIVEH KMARLRAIEV LSALKRG
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