| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3036 |
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| Symbol | |
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| ID | 4279940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3641962 |
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| End bp | 3643371 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135856 |
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| Product | nitrite reductase (cytochrome; ammonia-forming) |
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| Protein accession | YP_751713 |
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| Protein GI | 114564199 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.306753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATC TACTTATCGA TGTGATAATG AAAGCGACTC GGCCAATGCG AAGCAAGGTA
GGGTTAAGCA TTATTATTAG CGCAATGGCA TTGCTGAGTC TAACGTCTTG GTCGCTTCAA
AGTGCTGAAG TGGATCCTAA TCAACTAAAG TTTCCACAAC AATATGATTC TTGGCAAGCA
ACAGAAGAGC AAGTTGAACG AGACGATATA CTGGCACAAT ATCCTGCCAA TATCATTTTG
TGGGCAGGTT CATCATTTGC GAAAGAATAT CACAGCCCTC GCGGGCATCA GTTTGCTGTG
GCTGACGTGA CACATACCTT GCGTACTGGT GTTGCAATAG CTGAAGGCGA CAAAGGTTTA
TCTGCCAGTT GTTGGACCTG TAAAACACCC GATGCACCAA GATTGATTAA AGAAATGGGT
ATTCAAGGTT TTTCAGGTGC CAATTTTGTC GATTTAGGCC GTGAAATCAA ATCCGTTGTT
TACTGTAGTG ATTGTCATGT TGATGGCAGT GCTAAACTCG CATTACCACG CCCTCATGCT
CAAAATGCGA TGGAGAAAAT CAAACTGCCT TTTGATAAGC AAGACCGCAG CATGCAAGGC
GCTCAGGTTT GTGGTCAATG TCATGTGAGT TATTATTTCC AGCCTGAAAA TAATAACAAA
GTTAATATTC CATGGATTTT TGGTAGCACT GCTGATGAAA TTGAAAAGTA TTACGACACT
CGTCGCTTTT ACGAATGGAT CCACCCAATC TCTAAAACCC CAATATTAAA AGCGCGTCAT
CCAGAGTTTG AGCATTGGAG TCGTTCGGCT CACGCTAAGC AAGGTGTGAC GTGTATAACC
TGTCATATGC CAGCTGCGAC AGATGAAAAA GGCGCTACAT TTACTGACCA CAAGGTTGCT
GGCGCATTAG ACAATTTTGA TCGCGCTTGT ACAAGTTGCC ATAGCAGTAA AGCGGCCATC
ACCAAAAAGC TTGATAAAAC CAAAGCTAAT ATTGATGCTA AATCTCGTAA TGTAGAGTCA
TTGCTGATTA AAGCGCATTA CGAAGCCAAA GCGGCTTGGG ATGCAGGAGC CACATGGCCG
CAAATGAATG ATGCGATTAT GGCTATTCGT CATTCACAAT GGCGCTGGGA TTTTGCCACA
GCATCGCATG GAATGTACGC TCATAATCCT AAAGAAGGGA TTGAGTTACT GGATAAATCG
ACTGAACAGG TTACTTATGC CCGTGAAGCA TTAGCCCGCA TATTGAGTCA AATGTCAGTG
ACCAAGGTTG AGTACCCAGA TTACAGTACC AAAGAAAAAG CCCACGCCGC TATTGGCTTT
ATTGAAGCCG ACGCCATTAA AGCCAAACAA GCTTTTATTA AACAAGAAGT TGATAAGCAC
TGGCAGCCGG TAGCCAAAAA GGGTTACTAA
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| Protein sequence | MMDLLIDVIM KATRPMRSKV GLSIIISAMA LLSLTSWSLQ SAEVDPNQLK FPQQYDSWQA
TEEQVERDDI LAQYPANIIL WAGSSFAKEY HSPRGHQFAV ADVTHTLRTG VAIAEGDKGL
SASCWTCKTP DAPRLIKEMG IQGFSGANFV DLGREIKSVV YCSDCHVDGS AKLALPRPHA
QNAMEKIKLP FDKQDRSMQG AQVCGQCHVS YYFQPENNNK VNIPWIFGST ADEIEKYYDT
RRFYEWIHPI SKTPILKARH PEFEHWSRSA HAKQGVTCIT CHMPAATDEK GATFTDHKVA
GALDNFDRAC TSCHSSKAAI TKKLDKTKAN IDAKSRNVES LLIKAHYEAK AAWDAGATWP
QMNDAIMAIR HSQWRWDFAT ASHGMYAHNP KEGIELLDKS TEQVTYAREA LARILSQMSV
TKVEYPDYST KEKAHAAIGF IEADAIKAKQ AFIKQEVDKH WQPVAKKGY
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