Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3033 |
Symbol | |
ID | 4279937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3639159 |
End bp | 3640427 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135853 |
Product | amine oxidase |
Protein accession | YP_751710 |
Protein GI | 114564196 |
COG category | [R] General function prediction only |
COG ID | [COG2907] Predicted NAD/FAD-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.567673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA TTGCTGTAAT TGGTACTGGA ATTTCGGGGT TAACGTGTGC CCACCTATTA AGCCGTGAAC ACACGGTTAC CGTGTTTGAA GCTAATGATT ATATTGGTGG TCACACTGCG ACCATTGATG TGGAAGTGGC TGGGCAGCAA TATGCAATTG ACTCTGGTTT TATTGTGTTT AATGACCGGA CTTATCCGCT ATTTGAAATA TTAATGGCAC AACTTAATAT TAAGTCTTTA CCGACTGAAA TGAGTTTTAG TGTTAATAAT GCACTCACAG GGCTTGAATA TAACGGCCAT AATTTGTGGA GCTTATTTGC CCAACGTCGT AATTTGTTAC GCCCAAGTTT TTACCGGTTT TTAGGTGAAA TTGTTCGTTT CAATAATGGT TGTAAAGTTA TTTATGAGGC CGACAAATAC CCAACGTCTT CACTAGGTGA GTATCTTGAT CAACAAGGTT TCTCGGCCTT TTTCTGTGAG CATTACATTT TGCCTATGGG CGCGGCAATT TGGTCTGCCA GTATTGATGA TATGCGCGGC TTTTCATTGC GATTCTTTAT TCGTTTTTTC CAGCATCATG GTTTATTAAA TATTAATGAT CGCCCGCAAT GGTATGTACT TGAAGGTGGA TCGCGCAGTT ATATTCCAGC CTTAACCGCA CCGTTTAAAG ATCGTATCCA GCTTAATTCA CCCGTGAGTG GTATTAAACG TAGCGATGAT GGTGTGTATG TTCAGGTTGC CAACGGCGAA TGGCAGCACT TTGACGATGT GGTGTTGAGT TGCCATAGCG ATCAAGCACT AGCCATGTTA ACCGATGCCA CTCAAGATGA GATAGACGTC TTAGGCGCAA TGGAATATCA GAATAATGAA GTGGTGCTGC ACACAGATAT TAATTTATTG CCTAAGCGTA AAGCGGCATG GGCAAGTTGG AACTATCGTT TAGATGGTGT TAATCAGCAA GATATTGCTC AGCGTCCGGC TAGCGTGACG TACAATATGA ATATTTTGCA GTGTTTACCG AGTAGTGCAC CTACATTTTG TGTCACGTTA AATCAAACTG CATCGATTGA TGAAAGTAAA ATTTTGCGAA AGTTTAATTA TGCTCACCCA GTATTTAACG ATGCCAGCAT GAAGTCGCAA GCGAAAAAAT CACTCATTAA TGGTAAACAT AATACCTATT TTGCTGGTGC TTACTGGCAC AATGGATTTC ATGAAGACGG CGTTCGTAGC GCAGTTGAAG TATGCGATCT GTTTGGGATA AGTCTATGA
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Protein sequence | MKNIAVIGTG ISGLTCAHLL SREHTVTVFE ANDYIGGHTA TIDVEVAGQQ YAIDSGFIVF NDRTYPLFEI LMAQLNIKSL PTEMSFSVNN ALTGLEYNGH NLWSLFAQRR NLLRPSFYRF LGEIVRFNNG CKVIYEADKY PTSSLGEYLD QQGFSAFFCE HYILPMGAAI WSASIDDMRG FSLRFFIRFF QHHGLLNIND RPQWYVLEGG SRSYIPALTA PFKDRIQLNS PVSGIKRSDD GVYVQVANGE WQHFDDVVLS CHSDQALAML TDATQDEIDV LGAMEYQNNE VVLHTDINLL PKRKAAWASW NYRLDGVNQQ DIAQRPASVT YNMNILQCLP SSAPTFCVTL NQTASIDESK ILRKFNYAHP VFNDASMKSQ AKKSLINGKH NTYFAGAYWH NGFHEDGVRS AVEVCDLFGI SL
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