Gene Sfri_3033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3033 
Symbol 
ID4279937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3639159 
End bp3640427 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content41% 
IMG OID638135853 
Productamine oxidase 
Protein accessionYP_751710 
Protein GI114564196 
COG category[R] General function prediction only 
COG ID[COG2907] Predicted NAD/FAD-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.567673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TTGCTGTAAT TGGTACTGGA ATTTCGGGGT TAACGTGTGC CCACCTATTA 
AGCCGTGAAC ACACGGTTAC CGTGTTTGAA GCTAATGATT ATATTGGTGG TCACACTGCG
ACCATTGATG TGGAAGTGGC TGGGCAGCAA TATGCAATTG ACTCTGGTTT TATTGTGTTT
AATGACCGGA CTTATCCGCT ATTTGAAATA TTAATGGCAC AACTTAATAT TAAGTCTTTA
CCGACTGAAA TGAGTTTTAG TGTTAATAAT GCACTCACAG GGCTTGAATA TAACGGCCAT
AATTTGTGGA GCTTATTTGC CCAACGTCGT AATTTGTTAC GCCCAAGTTT TTACCGGTTT
TTAGGTGAAA TTGTTCGTTT CAATAATGGT TGTAAAGTTA TTTATGAGGC CGACAAATAC
CCAACGTCTT CACTAGGTGA GTATCTTGAT CAACAAGGTT TCTCGGCCTT TTTCTGTGAG
CATTACATTT TGCCTATGGG CGCGGCAATT TGGTCTGCCA GTATTGATGA TATGCGCGGC
TTTTCATTGC GATTCTTTAT TCGTTTTTTC CAGCATCATG GTTTATTAAA TATTAATGAT
CGCCCGCAAT GGTATGTACT TGAAGGTGGA TCGCGCAGTT ATATTCCAGC CTTAACCGCA
CCGTTTAAAG ATCGTATCCA GCTTAATTCA CCCGTGAGTG GTATTAAACG TAGCGATGAT
GGTGTGTATG TTCAGGTTGC CAACGGCGAA TGGCAGCACT TTGACGATGT GGTGTTGAGT
TGCCATAGCG ATCAAGCACT AGCCATGTTA ACCGATGCCA CTCAAGATGA GATAGACGTC
TTAGGCGCAA TGGAATATCA GAATAATGAA GTGGTGCTGC ACACAGATAT TAATTTATTG
CCTAAGCGTA AAGCGGCATG GGCAAGTTGG AACTATCGTT TAGATGGTGT TAATCAGCAA
GATATTGCTC AGCGTCCGGC TAGCGTGACG TACAATATGA ATATTTTGCA GTGTTTACCG
AGTAGTGCAC CTACATTTTG TGTCACGTTA AATCAAACTG CATCGATTGA TGAAAGTAAA
ATTTTGCGAA AGTTTAATTA TGCTCACCCA GTATTTAACG ATGCCAGCAT GAAGTCGCAA
GCGAAAAAAT CACTCATTAA TGGTAAACAT AATACCTATT TTGCTGGTGC TTACTGGCAC
AATGGATTTC ATGAAGACGG CGTTCGTAGC GCAGTTGAAG TATGCGATCT GTTTGGGATA
AGTCTATGA
 
Protein sequence
MKNIAVIGTG ISGLTCAHLL SREHTVTVFE ANDYIGGHTA TIDVEVAGQQ YAIDSGFIVF 
NDRTYPLFEI LMAQLNIKSL PTEMSFSVNN ALTGLEYNGH NLWSLFAQRR NLLRPSFYRF
LGEIVRFNNG CKVIYEADKY PTSSLGEYLD QQGFSAFFCE HYILPMGAAI WSASIDDMRG
FSLRFFIRFF QHHGLLNIND RPQWYVLEGG SRSYIPALTA PFKDRIQLNS PVSGIKRSDD
GVYVQVANGE WQHFDDVVLS CHSDQALAML TDATQDEIDV LGAMEYQNNE VVLHTDINLL
PKRKAAWASW NYRLDGVNQQ DIAQRPASVT YNMNILQCLP SSAPTFCVTL NQTASIDESK
ILRKFNYAHP VFNDASMKSQ AKKSLINGKH NTYFAGAYWH NGFHEDGVRS AVEVCDLFGI
SL