| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3022 |
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| Symbol | |
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| ID | 4279926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3629762 |
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| End bp | 3631114 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638135842 |
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| Product | beta alanine--pyruvate transaminase |
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| Protein accession | YP_751699 |
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| Protein GI | 114564185 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAT ATAAGCAAAA TGGAACTGGC GATTCATCGC AAACATTGCC AAACATGGCA
CATTTTTGGA TGCCGTTTAC TGCCAATAAG CAATTTAAGA CTAATCCTAG GCTTTTGGTT
TCGGCACAAG GAATGTATTA CACCGATATT GAAGGCAATA AAGTACTCGA TGCGACTGCC
GGTTTATGGT GTTGCAATGC TGGCCACGGC CGCCAAGAAA TTTCCCAAGC GGTAAGCCAA
CAAATTAGCC AAATGGATTA TGCACCGTCT TTTCAAATGG GCCATCCGCT CGCCTTTGAA
TTAGCGCATA AACTCAGTCA GCTGAGCCCC GACGGATTGG ATAAGGTGTT TTTTACTAAT
TCTGGTTCAG AATCGGTAGA CACCGCCCTA AAAATGGCGC TTTGCTATCA TCGCGCCAAT
GGCCAAGCCA CTCGTACTCG GTTTATCGGC CGCGAGCTTG GTTACCATGG TGTCGGTTTT
GGCGGGATTT CAGTTGGTGG GATCAGCAAT AATCGCAAAA CATTCAGCCA ACAATTACTC
CAAGGTGTTG ATCACTTACC TCACACCCTC GATATTGCCA ATAATGCTTT TAGCCACGGC
TTACCGCCAC ACGGTTTGGA TAAAGCAGAA GTGCTTGAGC AACTTATTAC CTTACATGGC
GCCGAGAACA TTGCCGCGGT CATTGTTGAA CCCATGTCTG GTTCTGCTGG GGTTATTTTA
CCGCCAGATG GATACTTAAC GCGGTTACGC GAAATCACCC AAAAGCACGG CATTTTATTA
ATATTCGATG AAGTGATCAC AGGCTTTGGC CGAGTCGGTG CCGCCTTTGC CAGCGAGCGC
TGGCAAGTTA CCCCAGACAT GATCACCACA GCCAAAGCCA TTAATAATGG TGCAATTCCA
ATGGGCGCGG TATTTGTTAG CAATACCATT CACGACACCT GCATGCATGG TCCTGATGAA
TTAATAGAAT TTTTCCATGG TTATACCTAT TCCGGTCATC CGGTCGCGGC GGCCTCAGCA
CTTGCTACCC TGTCTATATA TGAAGATGAA CAATTATTTG AACGCGCAAA AGGGCTTGAA
TCTTATTTCG AGCAAGCGGT TCACAGCCTT AAAGGCTTAC CAAACGTCAT TGATATTCGT
AATACCGGTT TAGTTGCAGG TATTCAACTG GCACCAAGTG ATAAAGGCGT GGGTAAACGA
GGTTATGACA TTTTTGATCA TTGCTTTAGG CATGGCGCGT TAGTGCGGGC AACGGCTGAC
ATTATTGCAT TATCTCCGCC ATTGATTGTG GAAAAGTCAC AAATCGACGA CATGGTTAAT
CACATTACCG ATGCAATTAA TGCTGTTGGT TAA
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| Protein sequence | MSEYKQNGTG DSSQTLPNMA HFWMPFTANK QFKTNPRLLV SAQGMYYTDI EGNKVLDATA
GLWCCNAGHG RQEISQAVSQ QISQMDYAPS FQMGHPLAFE LAHKLSQLSP DGLDKVFFTN
SGSESVDTAL KMALCYHRAN GQATRTRFIG RELGYHGVGF GGISVGGISN NRKTFSQQLL
QGVDHLPHTL DIANNAFSHG LPPHGLDKAE VLEQLITLHG AENIAAVIVE PMSGSAGVIL
PPDGYLTRLR EITQKHGILL IFDEVITGFG RVGAAFASER WQVTPDMITT AKAINNGAIP
MGAVFVSNTI HDTCMHGPDE LIEFFHGYTY SGHPVAAASA LATLSIYEDE QLFERAKGLE
SYFEQAVHSL KGLPNVIDIR NTGLVAGIQL APSDKGVGKR GYDIFDHCFR HGALVRATAD
IIALSPPLIV EKSQIDDMVN HITDAINAVG
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