Gene Sfri_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3020 
Symbol 
ID4279924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3627294 
End bp3627716 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content39% 
IMG OID638135840 
Producthypothetical protein 
Protein accessionYP_751697 
Protein GI114564183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCATA AGACCTTCTC TCGTTTAGCT ATTATTGCTG CTGGTGGCTT TTTTGGTTTT 
ATTTTGTGGA TTATTTACCT CGCCAATACT GGCAGTCAAA GTGTGTTTTT CGATGTAATA
AAACATGTTC CCTATGGTGA CAAGATTTGT CACATGTTGT TATTCGGGTT ATTAACTTTT
GTGGCCAATT TAGCGCTGCA GAGTCGTCAT TTTTGTATCG GGCGTCTTCC GCTTTATTAC
GGCACTGTGT TAGTGTCGAT ATTCGTCCTG AGTGAAGAAA TCAGCCAGGG TTTTATCCCA
TCAAGAACAT TAGACATCAT CGATTTAGTT GCCGATGCTG TAGGTATAAT TTTATTCAGT
TATTTAAGTG GGTTAACTCA GCGTTATATA GACAATCATC ATGAGAGTAT TCGTGTGAGT
TAG
 
Protein sequence
MTHKTFSRLA IIAAGGFFGF ILWIIYLANT GSQSVFFDVI KHVPYGDKIC HMLLFGLLTF 
VANLALQSRH FCIGRLPLYY GTVLVSIFVL SEEISQGFIP SRTLDIIDLV ADAVGIILFS
YLSGLTQRYI DNHHESIRVS