| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3011 |
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| Symbol | |
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| ID | 4279915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3616320 |
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| End bp | 3617675 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135831 |
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| Product | glutamate--ammonia ligase |
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| Protein accession | YP_751688 |
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| Protein GI | 114564174 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0174] Glutamine synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.858612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGT TAATCGCTTT TTTAAAAGAC AAAAAAATTA CCGAAGTAGA ATGTGTTATC
AGTGATATGA CTGGTATAGC ACGTGGCAAA ATTGCTCCAG TAGATAAGTT TGTATCAGAA
AAAGGCATGC GTTTACCTGA GAGCGTGCTA TTGCAAACAG TCACTGGAGA TTTCATTGAT
GATGAGGTTT ATTATCAACT TCTCGATGAT GCCGATATCG ATTTTGTCTG TGTTCCAGAC
GAAAATGCCG TGTTTATGTT GCCATGGACT GTTGAAGCTA CCGCGCAAGT TATTCACGAT
TGTTATGATC GTATGGGTAA TCCAATTGAA TTGTCACCGC GTAATGTGTT GAAGAAAGTA
CTTAAGCTTT ATGAAGATAA AGGTTGGGAA CCCGTTATTG CGCCAGAAAT GGAATTTTAT
CTGACTAAAC GTTCTGACGA TCATGATTTA CCGCTTAAAC CACCTATTGG TCGCTCTGGT
CGTCCTGAAG CTGGCCGTCA GTCTTTCTCT ATAGATGCTG CTAACGAATA CGATCCTCTG
TTTGAAGACA TGTATGACTG GTGTGAAATC CAAGGGTTAG ATATTGATAC CTTGATCCAT
GAAGATGGTC CTGCACAAAT GGAGATTAAC TTCAGCCATG GTAATGCATT GTCATTAGCC
GATCAGGTGT TCATTTTTAA ACGCACATTG AAAGAAGCCG CATTAAAGCA TGATGTGTGT
GCCACCTTTA TGGCTAAGCC CGTTACTGAT GAGCCTGGCA GCGCGATGCA CATTCACCAG
AGCGTACTGG ATATTAAAAC CGGTAAAAAC ATTTTCACCA AAGACGATGG CACTCAAAGT
AAATTATTCC TCAGCTATAT TGCTGGCTTA CAACAGTACA TTCCTGAATT GTTACCGTTA
ATGGCGCCAA GTGCTAACTC TTTCCGTCGC TTCTTACCGG GTACTTCTGC ACCTGTAAAC
TTAGAATGGG GCGTGGAAAA CCGTACTTGT GGCTTGCGTA TTCCTGAATC ATCACCACAA
AATCGCCGTA TCGAAAACCG TATTCCGGGT GCCGACGCTA ACTGTTACCT CGCAATCGCG
GCCAGTTTGT TATGTGGTTA TATCGGTATG GTTGACGACT TAAAACCTTC TACACCTGTG
ACAGGTAAGT CGAACGAAAG CCGTACTAAT AACGAAAACT GCTTACCGTT GACCTTAGAA
GAAGCCTTGG TGGCGATGCA AAGCAGCGAT GCTTGTATTG AGTATTTAGG TCAATCTTTT
ACCACTGGTT TTGTGGCGGT AAAACAAGCT GAACTTGAAA ACTTTAGACG CGTTGTGAGT
TCGTGGGAAC GTGAGTTCTT ATTACTAACG GTGTAA
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| Protein sequence | MDKLIAFLKD KKITEVECVI SDMTGIARGK IAPVDKFVSE KGMRLPESVL LQTVTGDFID
DEVYYQLLDD ADIDFVCVPD ENAVFMLPWT VEATAQVIHD CYDRMGNPIE LSPRNVLKKV
LKLYEDKGWE PVIAPEMEFY LTKRSDDHDL PLKPPIGRSG RPEAGRQSFS IDAANEYDPL
FEDMYDWCEI QGLDIDTLIH EDGPAQMEIN FSHGNALSLA DQVFIFKRTL KEAALKHDVC
ATFMAKPVTD EPGSAMHIHQ SVLDIKTGKN IFTKDDGTQS KLFLSYIAGL QQYIPELLPL
MAPSANSFRR FLPGTSAPVN LEWGVENRTC GLRIPESSPQ NRRIENRIPG ADANCYLAIA
ASLLCGYIGM VDDLKPSTPV TGKSNESRTN NENCLPLTLE EALVAMQSSD ACIEYLGQSF
TTGFVAVKQA ELENFRRVVS SWEREFLLLT V
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