| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3006 |
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| Symbol | |
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| ID | 4279910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3610459 |
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| End bp | 3611274 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135826 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_751683 |
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| Protein GI | 114564169 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACT TAAGTTTCTC TAAAGTGATG TTGTGGGTTG GGTTGATATT TTTATATGCG
CCAATGCTTA TTTTGGTCAT CTATTCATTT AATGACTCAA AACTGGTTAC CGTGTGGGGA
GGTTTTTCGC CTAAATGGTA TGGCGAGCTA TTTCAGGACC AGCAGATATT AAATGCAGTC
TGGACCAGTT TACGTATTGC CTTTTACAGC TCCACCATGG CAGTGATTAT TGGAACGATG
GCAGCGTTTG TGATGACTCG TTTTAGACGC TCATGGGCTA AGTTAACCTT GTCTAACATG
ATCACCGCAC CTTTGGTTAT GCCAGAAGTT ATTACTGGTT TGTCGTTGTT ACTGTTATTT
GTACAAATGT CAGAAACCTT TGGCTGGCCC ACTGAGCGCG GGATGTTTAC GGTATGGATT
GCTCACTCTA CTTTCTGTGC TGCTTATGTT GCGGTGGTAG TGTCGTCAAG ACTGCGTGAA
CTGGATTTGT CGATAGAAGA AGCCGCGATG GACTTAGGTG CAACGCGATT AAAAACCTTC
TTTTTAATCA CCATACCAAT GATAGCGCCA TCACTCATTG CCGGTTGGTT GTTATCATTT
AGCTTGTCGT TAGATGATTT AGTGATTGCC AGCTTTACCT CTGGCCCTGG TTCTACAACC
TTGCCTATGG TGGTATTTTC GTCAGTTCGC TTAGGGGTTT CACCTAAGAT TAACGCACTC
GCGACAATTA TTATTTTAGC GGTATCTTTA GTGGCTTTCT TGTCTTGGTA TTTTGCCCGC
CGAGCAGAGA AAAAAGCTAA AATTGCGATG GAATAA
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| Protein sequence | MKNLSFSKVM LWVGLIFLYA PMLILVIYSF NDSKLVTVWG GFSPKWYGEL FQDQQILNAV
WTSLRIAFYS STMAVIIGTM AAFVMTRFRR SWAKLTLSNM ITAPLVMPEV ITGLSLLLLF
VQMSETFGWP TERGMFTVWI AHSTFCAAYV AVVVSSRLRE LDLSIEEAAM DLGATRLKTF
FLITIPMIAP SLIAGWLLSF SLSLDDLVIA SFTSGPGSTT LPMVVFSSVR LGVSPKINAL
ATIIILAVSL VAFLSWYFAR RAEKKAKIAM E
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