| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3004 |
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| Symbol | |
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| ID | 4279908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3607436 |
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| End bp | 3608884 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135824 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_751681 |
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| Protein GI | 114564167 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTTTAA ATGATCCAAG CTTATTGCAT GAACAATGTT ATATCGATGG CCTATGGGTG
GGTGCTAACA GCGGCGAAAC GGTTGCTATA GCTAACCCTG CTACCCAAGA AATTATCGGT
AATGTGCCTG TTATGGGCAA AACAGAAACC GAAGCAGCCA TTACTGCAGC CAATAATGCC
TTACCGGCTT GGCGTGCGCT GACTGCCAAA GAGCGTAGCC AAAAGTTACG CCGTTGGTTT
GAGTTAATGC ATGAAAATGC TGAAGACCTA GCGTTGATGA TGACGACAGA GCAAGGTAAA
CCGCTGGCAG AATCAAGAGG TGAAGTAACC TATGCCGCCT CGTTTATCGA ATGGTTTGCT
GAAGAAGCTA AGCGTATTTA TGGTGATACC ATTCCTGGCC ATCAAGCAGA TAAAAGACTG
ACTGTTATTA AACAACCTGT TGGTGTGACT GCGGCGATTA CCCCGTGGAA TTTCCCTGCT
GCGATGATCA CCCGTAAAGC GGGCCCTGCA CTAGCAGCCG GTTGTACTAT GGTCGTTAAA
CCTGCGCCGC AAACTCCATT TACCGCATTA GCATTAGCTG AGCTTGCACA TCGTGCGGGC
ATTCCTGCTG GTGTGTTTAG TGTTATTACT GGTGATGCGA TTGCGATTGG TAATGCTTTA
TGTGAAAGCC CTATTGTGCG TAAATTATCT TTTACTGGTT CAACTGCGGT AGGAATTAAG
TTAATGGAGC AATGTGCTCC AACACTTAAA AAACTGTCAT TGGAGCTAGG TGGTAATGCA
CCGTTTATCG TTTTTAATGA TGCCGATATT GATGCCGCAG TTGATGGCGC AATGATTGCT
AAATACCGTA ATGCCGGTCA AACCTGTGTG TGTGCCAACC GTATTTATGT CCAAGCAGGG
GTGTATGAGC AATTCACCCA AAAATTTGCT GCAGCAGTGG CTAAATTAAG CGTCGGTAAT
GGCGTGGATA CAGGGGTGAA TATCGGCCCG TTAATCAATG CTGATGCAGT GACTAAAGTA
CAGCGTCATT TAGCCGATGC GGTTGCTAAA GGCGCAAGTA TCGTCACTGG CGGTAAAACA
CATAGCTTAG GTGGCTTTTT CTTTGAACCT ACTATTTTAC GTGACGTTGA TAAATCGATG
TTAGTTGCCA AAGAAGAGAC TTTTGGCCCA TTAGCACCGC TATTCAAATT CGACTCAGTA
GATGATGTGA TTAAACAAGC TAATGACACT GAATTTGGCT TAGCCGCTTA CTTTTATGGC
CGTGATATTT CGCTGGTTTA CAAAGTAGCA GAAGCACTTG AATACGGTAT GGTGGGCGTT
AACACCGGAT TAATCTCGAC CGAAGTCGCG CCATTTGGTG GCATTAAATC GTCTGGATTA
GGCCGCGAAG GCTCAAAATT TGGTATCGAA GAATACCTTG AAATGAAATA TATCTGCATG
TCAGTTTAA
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| Protein sequence | MILNDPSLLH EQCYIDGLWV GANSGETVAI ANPATQEIIG NVPVMGKTET EAAITAANNA
LPAWRALTAK ERSQKLRRWF ELMHENAEDL ALMMTTEQGK PLAESRGEVT YAASFIEWFA
EEAKRIYGDT IPGHQADKRL TVIKQPVGVT AAITPWNFPA AMITRKAGPA LAAGCTMVVK
PAPQTPFTAL ALAELAHRAG IPAGVFSVIT GDAIAIGNAL CESPIVRKLS FTGSTAVGIK
LMEQCAPTLK KLSLELGGNA PFIVFNDADI DAAVDGAMIA KYRNAGQTCV CANRIYVQAG
VYEQFTQKFA AAVAKLSVGN GVDTGVNIGP LINADAVTKV QRHLADAVAK GASIVTGGKT
HSLGGFFFEP TILRDVDKSM LVAKEETFGP LAPLFKFDSV DDVIKQANDT EFGLAAYFYG
RDISLVYKVA EALEYGMVGV NTGLISTEVA PFGGIKSSGL GREGSKFGIE EYLEMKYICM
SV
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