Gene Sfri_2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2989 
Symbol 
ID4279894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3589794 
End bp3590309 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content39% 
IMG OID638135809 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_751667 
Protein GI114564153 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.217174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTA TTTACATAAG TTTGGGCACT AATATTTCAC CAGAGAAACA TCTTAAAGCC 
GGTTTGGTTG ATTTACAGCA ATGTTTTGGC CCATTACAAT TATCACGGGT TTTTGAGAGT 
GAATCGGTAG GGTTTAAAGG CACTAATTTT TTAAATATGG TGGCCGCGGC TGATACCGAT 
TTGTCAATTG CACAGGTTGT GACAACATTT AAACAAATTG AACAAGACAA TGGCCGTATT 
AGAGGTGAGA AGAAATTCAG CCCAAGGAGC CTTGATATTG ATTTGTTGCT GTATGACGAT 
GTTATTTGTG ACATTCCCGT AGAATTACCC CGTGGCGAAA TTTTGTTTAA TGCGTTTGTA 
TTGTGGCCTT TGGCAGAATT AGTCCCTAAT CTGTCTCATC CGGTGACGTT ACAAACCTAT 
CAAACACTTT GGCAGAATTA TGACAAACAG TGTCAACAAT TGTGGCCTAT TGTATTTGAG 
TTCCCACCAG AACTATTACC TACCAACACG TTATAA
 
Protein sequence
MARIYISLGT NISPEKHLKA GLVDLQQCFG PLQLSRVFES ESVGFKGTNF LNMVAAADTD 
LSIAQVVTTF KQIEQDNGRI RGEKKFSPRS LDIDLLLYDD VICDIPVELP RGEILFNAFV 
LWPLAELVPN LSHPVTLQTY QTLWQNYDKQ CQQLWPIVFE FPPELLPTNT L