| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2987 |
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| Symbol | |
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| ID | 4279892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3588010 |
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| End bp | 3588852 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135807 |
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| Product | ribosomal RNA large subunit methyltransferase A, putative |
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| Protein accession | YP_751665 |
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| Protein GI | 114564151 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.476596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTAT CTTTATTATG TCCAGTGTGT TCAGCTCCAC TAAATCAACA TCAAGCTTCA
GCGGGATTTT ATTGCGACAA CAAACATCAT TTTGATAAAC ACCCTAATGG TTACTGGCCA
CTGCTGAGCA ACGTAAAAGG CAAGAGTAAG CCGAAAGTGG AGTCTCGCCA GCAAATGCGT
GGGCGACATT TTTTATTAGA AACAGGTTTG TTTGCACCGT TAATTAAACA ACTTCAAGCT
GTACTGCTGG ACTTATGTGC TTCTAATCGT GACGCAGAAT TACAGCATAT CGATTACCAA
TGCGCTGATG GATATTATTT GCGTCAGCTT GTTCCTGCAC TAGTTGAAAC AAATGTATCG
TGCCAGCACT GGGGCATTAC TGATGCTGAA AACGCAATAT TTGCAGCGGC AAAATCTGAA
ACACCGGCGA ACTTATTGTT GTTGGCACTA AAAAAATTGC CCTTTGCCTC GCAATCAGTC
GATATCGTGA CGGTTCTTGA TTCACCGTTA AAGGGGAAAG AATGCATTCG GATTTTAAAA
GATGATGGTC GAATTGTATT GTTGCAGCCT GGTATTAGGC ATTTATGGCA AATTAAACAA
CAAGTTTATC CAGACTTAGT CGAAAAACCG TTGCAGTTAA ATTTACCTAA TGATGTTGAA
ATTGAGGCCC AGCAACAAGT GGTATTTACT CAATCTGTGA CCGGTGAGCA GGCATTAACA
CTCCTTGATA TGTCGGTATT TGGTTGGCGT GCTAATGATC AGTTAAAGCA TCAAGTTAAA
TCGACGGCAA TCAGTGAGTT AGAGTTTGAT TGGCAGATCA TAACGCTCAA AAAACGCTTA
TAA
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| Protein sequence | MTLSLLCPVC SAPLNQHQAS AGFYCDNKHH FDKHPNGYWP LLSNVKGKSK PKVESRQQMR
GRHFLLETGL FAPLIKQLQA VLLDLCASNR DAELQHIDYQ CADGYYLRQL VPALVETNVS
CQHWGITDAE NAIFAAAKSE TPANLLLLAL KKLPFASQSV DIVTVLDSPL KGKECIRILK
DDGRIVLLQP GIRHLWQIKQ QVYPDLVEKP LQLNLPNDVE IEAQQQVVFT QSVTGEQALT
LLDMSVFGWR ANDQLKHQVK STAISELEFD WQIITLKKRL
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