Gene Sfri_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2982 
Symbol 
ID4279887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3582628 
End bp3583737 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content43% 
IMG OID638135802 
Productgeneral secretion pathway protein B 
Protein accessionYP_751660 
Protein GI114564146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTT TATTAGATGC GGTTAACCGT AAAAAGCAGC AACAAGGTGA TGTTGTCGAT 
ATTATGTCGA CGCAGCCGCC TCAATATACA TCGCAATCTA ACAGCTCAAA TAAGTTGAAT
AAGTATAGTC TTTTGGCCGT AGCCATTGCC TTGGGTATTG GCGCTGCATG GGGTATGAGT
GTGCTATTAC AGTCACCATC AGGATCAGCA TCGTTAACGA CTGTCCAACC CAGTGGCGCT
AATGCACTGC AAGCTGTCAC GGCCCCTGTC ACTGTTACGT CAAATAAAGC AGCTGAAGCA
TCGACCGTTA AACAACATGA ACCCGCAGTG CAAAGTAACG ATGATATTCG TTTAGCGGGT
AAGGTGGCAT TGCCTATTGC CAAACCGTTC AATACGAATG TAATGAACAC GCAAGCAGCA
AGTTATAATA ACAATGGTTA CGCTGAATCT TCTGGTGTGA ATGAATTATA CCTGCAAGAA
AATGATGGGC AGCGCAGTTT TCAACAAGCT AACTCTCAAC AATTCAACTC TCAGCAAACC
GGTTCTGAAC AGGTTAATTA TCAAAGTGAG CAAGATAGCA GAGTTGATGA ATATCAAACA
CAAGAGAACA ATCGTCAACA GGCACAGCTG CGAGAAGCGA TTGTATTGGG TGCTAAAGCT
AATCGCCGAG GTTTAGCTGA GCTTGAAGCA TTGCGCTTGC AAGTGAATGC TGCCGCAGAA
GACGTCGATT TCGCCTCTGT TAAAGCACCA TCAAATAATG AACATAATAA TTTGATTGCT
GCATTTGAAA CGGCGCTTAA AGACGTTGAA TATGAACAGT CGGCTAATCA ACAAGTGACG
TCAGCAAAAT TAGATCCTAT TCCTCGACCT TCAAATCAGC AAATCCCTAA GTATGGTGAC
TTACCCGCGA GCGTGCAGTT ACAAGTACCC GAGTTTAATA TTAATGCCCA TGTATATTCG
ACAGAACCAA GTAACCGTTG GTTAAGTGTC GATGGGGTTG AATTACAGCA GGGCGATATG
ATTAAGAATA AGCTGACGAT TGTAGAAATA CGACCTCGAG ATATCGTACT AGAAATTGAC
GGCGAGCAAT TTAGAGTGCC AGCAATTTAG
 
Protein sequence
MSILLDAVNR KKQQQGDVVD IMSTQPPQYT SQSNSSNKLN KYSLLAVAIA LGIGAAWGMS 
VLLQSPSGSA SLTTVQPSGA NALQAVTAPV TVTSNKAAEA STVKQHEPAV QSNDDIRLAG
KVALPIAKPF NTNVMNTQAA SYNNNGYAES SGVNELYLQE NDGQRSFQQA NSQQFNSQQT
GSEQVNYQSE QDSRVDEYQT QENNRQQAQL REAIVLGAKA NRRGLAELEA LRLQVNAAAE
DVDFASVKAP SNNEHNNLIA AFETALKDVE YEQSANQQVT SAKLDPIPRP SNQQIPKYGD
LPASVQLQVP EFNINAHVYS TEPSNRWLSV DGVELQQGDM IKNKLTIVEI RPRDIVLEID
GEQFRVPAI