| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2980 |
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| Symbol | |
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| ID | 4279885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3579681 |
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| End bp | 3580967 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135800 |
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| Product | glutamate-1-semialdehyde aminotransferase |
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| Protein accession | YP_751658 |
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| Protein GI | 114564144 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.823832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCGTT CCGAAGTTTT ATTTGAACAG GCTAAAAAAA CCATTCCTGG TGGCGTTAAT
TCACCTGTAC GCGCCTTTAA TGGTGTCGGT GGTTCACCTT TGTTCATTGA AAAAGCTGAT
GGCGCTTATA TTTTTGATGC CGATGGTAAA AAGTACATCG ATTATGTAGG TTCATGGGGA
CCGATGATTT TAGGCCATAA CCACCCTAAA ATTCGCCAAG CGGTATTAGA CGCGGTTGAT
AATGGCTTGT CATTTGGTGC GCCGACTGAA CTTGAAGTGA AAATGGCTGA AAAAGTCATT
TCGATGGTGC CATCAATAGA ACAAGTTCGT ATGGTCAGTT CAGGCACTGA AGCCACCATG
AGTGCAATTC GTTTAGCCCG TGGTTTTACT AACCGTGACA ACATTTTAAA ATTTGAAGGC
TGCTACCATG GTCATGCTGA CTGCTTATTA GTAAAAGCAG GTTCTGGTGC ATTAACGTTA
GGACAACCAA GCTCTCCTGG CATTCCTGAA GATTTTGCTA AACACACCTT AACTGCAACC
TATAACGACC TTGATTCTGT CCGCGCTATA TTTGAACAGA ATCCTGAAAG TATCGCTTGT
ATCATCCTTG AGCCTGTTGC CGGCAACATG AACTGTATTC CACCAGTGGA AGGGTTTTTA
CAAGGTTTAC GTACAATTTG TGATGAATTC GGTGCGTTAC TGATTATTGA TGAAGTGATG
ACCGGCTTCC GTGTATCTAT GAGCGGCGCA CAAGGTCACT ACGGTGTAAC GCCAGACTTA
ACCACACTAG GTAAAGTGAT TGGCGGCGGC ATGCCTGTGG GCGCATTTGG TGGCCGTAAA
GATGTTATGC AATTTATCGC ACCGACAGGC CCTGTCTATC AAGCGGGTAC GTTATCTGGT
AATCCTATTG CGATGTCGGC AGGCTTAGCG CAAATGGATG CATTGTGTGA ACCCGGTTTA
TATGAAGCAC TAGCTGACAA AACAAAGCGG GTTGCAGAAG GCTTTAAAGC CGCAGCAGAC
AAACATGGTA TTCCATTAAA TATTACTTAT GTGGGTGGCA TGTTTGGTTT CTTCTTTACT
GAAGATAACA CGCCAATGAC CTCGTTTGCC CAAGTCACAA AATGCAACAT GGAGCATTTC
CGTCATTTCT ACCATGCCAT GTTAGATGAA GGTATTTATT TAGCGCCAAG TGCTTATGAA
GCAGGCTTCA TGTCTATGGC TCATGGTGAT GCTGAAATTG AATATACTTT AGCTGCTGTT
GATCGCATTT TTGCGGCAAT GAAATAA
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| Protein sequence | MTRSEVLFEQ AKKTIPGGVN SPVRAFNGVG GSPLFIEKAD GAYIFDADGK KYIDYVGSWG
PMILGHNHPK IRQAVLDAVD NGLSFGAPTE LEVKMAEKVI SMVPSIEQVR MVSSGTEATM
SAIRLARGFT NRDNILKFEG CYHGHADCLL VKAGSGALTL GQPSSPGIPE DFAKHTLTAT
YNDLDSVRAI FEQNPESIAC IILEPVAGNM NCIPPVEGFL QGLRTICDEF GALLIIDEVM
TGFRVSMSGA QGHYGVTPDL TTLGKVIGGG MPVGAFGGRK DVMQFIAPTG PVYQAGTLSG
NPIAMSAGLA QMDALCEPGL YEALADKTKR VAEGFKAAAD KHGIPLNITY VGGMFGFFFT
EDNTPMTSFA QVTKCNMEHF RHFYHAMLDE GIYLAPSAYE AGFMSMAHGD AEIEYTLAAV
DRIFAAMK
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