| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2978 |
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| Symbol | |
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| ID | 4279883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3576404 |
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| End bp | 3578128 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135798 |
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| Product | Cl- channel, voltage-gated family protein |
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| Protein accession | YP_751656 |
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| Protein GI | 114564142 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAATTTA AGATAAATAA AGCCGCTATT ATTCACGCCA AAAGAGCTAC GCGCAAATAT
CTACGTAACG AATTTAGAGA TAAGTTATCT CAGGCTAAAA TTAGTGTGCA ACTTTGTGCA
CTCGCACTGT TGTTTGCCAT CATTGCCTCA CTAGTGATCA TCTTATTCCG GTTAAGCTTG
GTGTGGGCAG AACAATACCT ACATGCAGAT TCCATGAGCT TTAGCTCAAC CTTAAGCGAT
TGGCGATCCT ACTTACCTTT AATTGGCGCA TTGCTTATTT GGTTGCTGTC ATTGTTGGGA
TCAAAGCGAT ACCGGCGCAT GGGCATTGCT TATGTATTGC ATCGATTTAA ATTGCACTAC
GGTAAGGTAC CGCTTCAATC AGCTGCTGGA CAGTTTTTCC AAGCATTAAT CGCGCTGATG
ACCAATTTCT CAGTCGGAAA AGAAGGCCCT GCGATTCACT TAGGCGCAGT GAGCGCCAGT
GTTATGGCTG AGAAGTTTTC ATTACCAGAC AATAGCGTAC GCATTATGTG TGCTAGCGGT
ATTGCCGCCG GTATTGCCGC CACCTTTAAC GCGCCACTTG CTGCGGTTTT GTTTGTGTTT
GAAGTCATTG TACGAGAGTA CAAAATTCAT TACTTCTTCC CTATCATGCT ATCTGCCATT
TGCGGCGCGG TATCAAGCCA ACTTGTGTTT GGTAATATTC ACGAATACGA TTTGATCAAT
GTGATCCATA TTCCGCTCGA TCATTATCCT ATTTTACTCA TTGGCGGGCT TGCGCTGGGA
TGTGTCGCTG CCCTATTTAA TTTTTCACTG ATGAAAGTTA CTGCGACAGG CCAGCACTGG
CCATTAATTT ATCGACTGCT CATTGCTGCT GTAGTCACAA CGCTAGTTGG TTTAGTCATG
CCACAGGCAT TAGGCTCAGG CGATTTCGCC ATTAATGAAG CCATTAGTGA GCATCCTAGT
TTACTGTTTT TAATCGCGCT GTTATTAGCA AAAATGTTGG CGACCATTGC GGCTATTGGC
TTTGGCGTAC CAGGCGGACT CATCGGCCCT CTCTATGGTA TTGGCGCATT AATCGGAGCA
ATTCTAGCTC TAGTCAGTAG CATAATATTT CCGTCAATTG CGCCTTATGT TGGGCTATAT
ACCGTGATTG GGATGACGGC GATGATGGGG GTTTGCCTGA GTGCCCCCCT AGCAGCATTA
GTTGCACTTC TTGAATTAAC CAACGATGCT TCGATTATTT TACCGGCCAT GTTTGTCACC
ATTCCAGCAT TTTTGGTCGC GTATCAAGGA TTTAACACTA ACTCTATCTT GCTAAAACAA
CTAGATATTA TGGGGCTTGG TTACAAAGTC GCTCCGCTTA ATCAAGGGTT GCAAAAGAAA
GGTGTTAGAG TGTTAATGGA TAAGCGATTT GTCATTGTGA ATGATGATGA TGAACTGCTA
CTTGAAGTAC TAAAACGGGC AGCCGGTCGC CCAGTACTAG TGCGTAATGC TGAGGGAGAA
ATTGAAATGC TGCGCCTTGA AATGCAGTCC TTTGAAGATT CGACCACGCT ATCACGTCTT
CCTATGCCGG GGTTACCTGA CACTGCCACC TTAAATGAAG CCTATGAGGC ACTGGTCGCG
AAACGCTCCG GCGAAGTGTA TATCTATCGA GGCACGAATC AAAAAGTGGT TGGGGTAATA
AGTTGGGCTA ATTTACTTCA AGAAATTCGC TCAGGTCAGG TATAG
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| Protein sequence | MQFKINKAAI IHAKRATRKY LRNEFRDKLS QAKISVQLCA LALLFAIIAS LVIILFRLSL
VWAEQYLHAD SMSFSSTLSD WRSYLPLIGA LLIWLLSLLG SKRYRRMGIA YVLHRFKLHY
GKVPLQSAAG QFFQALIALM TNFSVGKEGP AIHLGAVSAS VMAEKFSLPD NSVRIMCASG
IAAGIAATFN APLAAVLFVF EVIVREYKIH YFFPIMLSAI CGAVSSQLVF GNIHEYDLIN
VIHIPLDHYP ILLIGGLALG CVAALFNFSL MKVTATGQHW PLIYRLLIAA VVTTLVGLVM
PQALGSGDFA INEAISEHPS LLFLIALLLA KMLATIAAIG FGVPGGLIGP LYGIGALIGA
ILALVSSIIF PSIAPYVGLY TVIGMTAMMG VCLSAPLAAL VALLELTNDA SIILPAMFVT
IPAFLVAYQG FNTNSILLKQ LDIMGLGYKV APLNQGLQKK GVRVLMDKRF VIVNDDDELL
LEVLKRAAGR PVLVRNAEGE IEMLRLEMQS FEDSTTLSRL PMPGLPDTAT LNEAYEALVA
KRSGEVYIYR GTNQKVVGVI SWANLLQEIR SGQV
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