| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2972 |
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| Symbol | |
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| ID | 4279877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3570873 |
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| End bp | 3572411 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135792 |
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| Product | peptidase M23B |
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| Protein accession | YP_751650 |
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| Protein GI | 114564136 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000246824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGC TTCTTACTTT ATTCACATTG CTGCCAAAAG CACATCAAAT CACATTATCT
TTACTGGTGA TTCTAACGAC ATTTATTCTG ATGTTTCCAT CGGAAGACGC TCAAGCATCT
AAACAAACCC GATTGGTAAG TCAATCTGCT GACAAATCAG ATATAGAAAC CAATGAACGT
TATGCTATTC CCTTAGCCTT TCGCACCCCA ACTGCACCGA GTCATAATGA CCGTATCGTT
GATGATGAAT CGACTGATTT CATATCAAAT GATGCCCTTG CATCAAGTGA TAATAGTGAA
GAAGTAAGCA GTGGCGAAAC TCCTGACGAT GAAGCATTTT CCCAACATCT TGCCATGTTG
CAAACCAGTA CTTCTGATAT CGATGGCATG ATTAATGATC TCGATCAGCA AGTTGCCACT
CAAAAAGCCA AAATAAAACA ACAAGCGGCT AACGATGATT ATAGTGTTGA ATACTATGAA
GTCGCTAAAG GCGATACCTT AGGCGGCTTA TTTAGCCGTG CAGGACTCAG CGCTAAAGAT
GTCTATGACA TTACTCAATT ACCCTTAGCG AAAAAGAATC TGCTAAAAAT TATGCCGGGC
GAAGAAATCG CCATCAGTAA AAATGCCCAA GGTGAATTAC AAGAATTAAC CTACCGCATG
GATAAAGTGT CGACCTTAAT TATCAGTCAA CATAATGAAC AATACAAAGA AACGGTGAAC
ACTAAAGAAG TCGTTAATCG CACCTCGTTT ATTAGCGCCA ATATTAAAAG CAACTTTTGG
AATGCCGCTG CCGATGCAGG CTTGTCTGGT AACCACATTA TGGAGTTGGC CAATATTTTT
GGTTGGGATG TCGACTTTGC CCTCGATATT CGCAAAGGCG ATCACTTTTC GTTGTTATTT
GAACAAGAAT ACGCCGACGG TCAATTTTTA CGTAATGGCA ATATTCTCGC GGCAGAGTTT
ATTAACCAAG GGGAACGTTA CACCGCAGTA CGTTATACCG ACGGTGAATA CTATTCAGAG
AATGGCAGTA GCATGCGTAA AGCCTTTTTA CGTTCGCCAG TAGACTTTAA ATATGTCAGT
TCTAACTTTA ACCCGCGTCG CTTGCACCCA GTAACAGGGC AAATTAAAGC CCACCGCGGT
GTTGATTATG TCGCCGCCAT TGGCACGCCG ATTAAAGCGG CTGGTAAAGG TAAAGTGGTT
GAGGCTGGTT ATAACCAGTT TAATGGCAAC TATGTCTTCA TTAAGCACAA CGAAACCTAC
ACCACTAAGT ATTTACATTT AACTAAGCGC AAAGTAAATC GTGGTGAAAC GGTTAAACAA
GGCCAAATAA TCGGTACTCT GGGTAAAACA GGCCGAGTCA CTGGCGCTCA TTTACATTAT
GAATTTATTG TAAATGGGGT TCATCGCAAT CCACGAACTA TCGATTTACC TAAATCAATG
CCAATTGATC GCAGAGAGAA GAACAAATTC GCTGCACTCA GCAAGCAATT GATGACAAAA
CTAAAATCAA ATCAACAACA GCAATTGGCA AGTAATTAA
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| Protein sequence | MAKLLTLFTL LPKAHQITLS LLVILTTFIL MFPSEDAQAS KQTRLVSQSA DKSDIETNER
YAIPLAFRTP TAPSHNDRIV DDESTDFISN DALASSDNSE EVSSGETPDD EAFSQHLAML
QTSTSDIDGM INDLDQQVAT QKAKIKQQAA NDDYSVEYYE VAKGDTLGGL FSRAGLSAKD
VYDITQLPLA KKNLLKIMPG EEIAISKNAQ GELQELTYRM DKVSTLIISQ HNEQYKETVN
TKEVVNRTSF ISANIKSNFW NAAADAGLSG NHIMELANIF GWDVDFALDI RKGDHFSLLF
EQEYADGQFL RNGNILAAEF INQGERYTAV RYTDGEYYSE NGSSMRKAFL RSPVDFKYVS
SNFNPRRLHP VTGQIKAHRG VDYVAAIGTP IKAAGKGKVV EAGYNQFNGN YVFIKHNETY
TTKYLHLTKR KVNRGETVKQ GQIIGTLGKT GRVTGAHLHY EFIVNGVHRN PRTIDLPKSM
PIDRREKNKF AALSKQLMTK LKSNQQQQLA SN
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