Gene Sfri_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2969 
Symbol 
ID4279874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3568352 
End bp3568978 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content45% 
IMG OID638135789 
Producthypothetical protein 
Protein accessionYP_751647 
Protein GI114564133 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.59212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGT GGATCTATTT TTTTGATTTA TGTGGTACCG CGGTATTTGC CCTTTCGGGA 
GCGTTAGCTG CGGGCAAGCA TCGTATGGAC CCCTTTGGCG TTATCGTGTT GGCTTCTGTT 
ACTGCAATTG GTGGCGGCAG TATTCGCGAT GCGTTAATAG GTGCCACGCC AGTTTTTTGG 
ATCCGCGATC CTAATTATAT GCTCGTCATT CTTGCGACCG TAATAACCTG CTTAGTGTTA 
GTGCGTAAAC CGCATAAATT ACCCCCACGC TCATTATCTA TTGCCGATGC ACTCGGTTTA 
GCACTATTTA CCGTAATTGG TGCAGAAAAA GCCTTATTGC TTGAATTATC TGGTATGGTC 
GCGGTAGTGA TGGGATTAAT AACCGGTGTC GGTGGTGGTA TTATCCGAGA TTTGTTATGT 
AGGCAAATTC CAATGGTGTT GCGAACGGAA ATTTACGCAA CCGCTTCCAT CGTTGGAGGG 
ATCTGTTATA CCTTAAGCAT ATTTGTCGGC ATGGATAGCA TGACATCGAT GTTGATCGCT 
ATGTTCAGCA CGCTAATCAT CCGTCTGAGT GCTATCCGCT GGCACTTATC TTTACCGGCT 
TTTGATTTGA AAACAAAGAG AATTTAA
 
Protein sequence
MSQWIYFFDL CGTAVFALSG ALAAGKHRMD PFGVIVLASV TAIGGGSIRD ALIGATPVFW 
IRDPNYMLVI LATVITCLVL VRKPHKLPPR SLSIADALGL ALFTVIGAEK ALLLELSGMV 
AVVMGLITGV GGGIIRDLLC RQIPMVLRTE IYATASIVGG ICYTLSIFVG MDSMTSMLIA 
MFSTLIIRLS AIRWHLSLPA FDLKTKRI