| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2963 |
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| Symbol | |
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| ID | 4279868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3561270 |
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| End bp | 3562082 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135783 |
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| Product | putative sterol desaturase |
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| Protein accession | YP_751641 |
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| Protein GI | 114564127 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGACG ATATTTCATC CATTCGACTC GGGGCATTTT TAACGATATT GATAATAATG
CTGCTACTGG AGTTTTGGTT GCCGGCTAGG CATTTACCCA ACAGAGCCAA CGCACCGAAA
CCAGCTACGC GCTGGATAGG CAATATCGGT TTATTGGTGA TTTCAGCAAT AGCTGCCAGA
TTAGTGTTAC CAATAGGATT AGCAGGTATT GCACTATACT GTCAGCAGCA ACAATGGGGG
CTGTTCAATT ATATTGCATT ACCTGATTGG GCTAGCATCA CCATAAGCTT ATTGTTATTA
GACCTAGTAA TTTATTGGCA ACACAGGCTG TTTCATCGTA TACCTTTATT GTGGCGATTA
CATAAAGTTC ATCATGCTGA TGTTCATGTC GACAGTACTA CTGCGTTGCG ATTTCACCCA
TTAGAAATTA TCGCCAGCAT TGGGATTAAA GCATTAGCGA TCGTCCTACT AGGCATACCA
GCCAGTGCTG TGATCTTATT TGAGATTTTA TTAAATGGTT TAGCCATATT TAACCATGCC
AATATCCGGT TATCACCAAA GCTAGAACGC ATCGTCAGAA CCGTATTAGT GACTCAAATA
TTGCACCGAA TTCATCACAG CCAAATAATG CGCGAGAGCA ACAGCAACTT TGGTTTTAGT
ATTGTGTGGT GGGATCGGTT ATTTGGTACC TATTCTGCTA AGGCGAGTAA AGCTGACGAG
GACCTCGATA TAGGGTTAAT CGAATACCCA AACGCGAAAC AAAACGCTTG GCTAACAGGG
TTATTATGGA TGCCGTTTAC CCATAAAAAA TAA
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| Protein sequence | MMDDISSIRL GAFLTILIIM LLLEFWLPAR HLPNRANAPK PATRWIGNIG LLVISAIAAR
LVLPIGLAGI ALYCQQQQWG LFNYIALPDW ASITISLLLL DLVIYWQHRL FHRIPLLWRL
HKVHHADVHV DSTTALRFHP LEIIASIGIK ALAIVLLGIP ASAVILFEIL LNGLAIFNHA
NIRLSPKLER IVRTVLVTQI LHRIHHSQIM RESNSNFGFS IVWWDRLFGT YSAKASKADE
DLDIGLIEYP NAKQNAWLTG LLWMPFTHKK
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