Gene Sfri_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2962 
Symbol 
ID4279867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3560608 
End bp3561273 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content46% 
IMG OID638135782 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_751640 
Protein GI114564126 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGATA GATTTATCAC CCCAGTAATA AAGCCACTGT TAGCGCCCGT TGTGCTGCTA 
CTAGACAAAA AGAATGTCCA TCCCGATCAG CTCACCTTAG TCGGTTTCGG TTTCGGCATG 
TTGGCAGTAC CGTTACTGGC ATTACAACTT TGGTATGGCG CGTTGTTTTT TATTGCACTG 
AATCGGATTG TTGACGGACT CGATGGCGCC CTTGCTCGCC ATCAAAAACA CACCAGTGCT 
GCGGGTGGCT ATTTAGATAT TTGTGTCGAC TTTCTGTTTT ATGCGGCCAT TCCGCTCGGG 
TTCGCCTTAG CCAACCCTAC TGAAAACGCC TTAGCCGCGG CAGTGTTGTT AACCGTGTTT 
ATCGGCACTG GCTCAAGCTT TTTGGCCTTT GCCATACCGG CCGAAAAGCT ACATTTACCT 
CGACCACAAT TTGCCAATAA GAGCTTTTAT TTTTTAAACG GCCTAACCGA AGGCACCGAA 
ACCATCGCCT TTTTCGTCGC ATTTTGTTTG TGGCCGGCTT ATTTCCCAGA GCTTGCCTAT 
AGCTTTGCTT TTTTAGGCGC GATTACTATC TTCACCCGTA TACACGGCGG CTATCACACT 
CTGAAAAATC ATACCTTGAA AAAAAACACT TCAGTTAATC CATCTCAACG AGGTAAATCA 
ACATGA
 
Protein sequence
MLDRFITPVI KPLLAPVVLL LDKKNVHPDQ LTLVGFGFGM LAVPLLALQL WYGALFFIAL 
NRIVDGLDGA LARHQKHTSA AGGYLDICVD FLFYAAIPLG FALANPTENA LAAAVLLTVF 
IGTGSSFLAF AIPAEKLHLP RPQFANKSFY FLNGLTEGTE TIAFFVAFCL WPAYFPELAY 
SFAFLGAITI FTRIHGGYHT LKNHTLKKNT SVNPSQRGKS T